Pairwise Alignments

Query, 1071 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1064 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  449 bits (1154), Expect = e-130
 Identities = 348/1112 (31%), Positives = 545/1112 (49%), Gaps = 149/1112 (13%)

Query: 19   LSLSVSAQTITLNGNVKDTTGEPIIGASIVEKGNTTNGTITDLDGNFSLKVPANAT-VVI 77
            +++    QT T+ G V D  GEP+IG SIV KG +T GTITD DG FS+ +PA +  +V+
Sbjct: 43   ITVQAVMQTKTVKGTVLDENGEPLIGVSIVVKGTST-GTITDFDGKFSINLPAGSKELVV 101

Query: 78   SYIGMKTQEIAIKGKSKIDVTLSDDAKALDEVVVIGYGTAKRKDITGSVATVNAEALTVV 137
            SYIG K Q I + G + +++ +  D +ALDEVVVIGYGT K++D+TG+VA+V +E +T+ 
Sbjct: 102  SYIGYKEQAIIVSGNAPLNIKMVPDTQALDEVVVIGYGTVKKRDLTGAVASVKSEDITMN 161

Query: 138  PVASATEALTGKMAGVQITTTEGSPDAEMKIRVRG--------GGSITGDN-TPLFIVDG 188
            P  +  +AL GK+AG+ IT + G   +   +++RG         G+I+ D   P +I+DG
Sbjct: 162  PGVNPMDALQGKIAGLDITNSSGQAGSSPTVQLRGTRSLQLDEDGNISSDAFKPTYIIDG 221

Query: 189  FPVESISDIPASDIEDMTVLKDASSTAIYGSRGANGVILVTTKSGKEGKISVNYNAYYSW 248
             P + I+ +  +DIE + VLKDASSTAIYGS GANGVI+VTTK  K GK  +N+NA Y+ 
Sbjct: 222  MPGD-IATLNPNDIESIEVLKDASSTAIYGSSGANGVIIVTTKGSKSGKPVINFNA-YAG 279

Query: 249  KKMAKQLNTLSSGD----YAKWQYELAMLNSGKHDTINPDDYTKVFGNYQDIDLYENIEG 304
              M  ++  + +GD    Y K  Y+           +   +  ++FG  +  D  +N + 
Sbjct: 280  TTMGARVPKMRTGDSYINYIKDSYK----------PVGTTNEEEIFG--ERYDAIKNNQW 327

Query: 305  NNWQDQVFGRTGHTFNHNLSINGGSDKTKFAFSYAHMDDKAIMQDSDFKRDNLSLKVNHK 364
             NW D+V   +G   N+++S+ GG++KTK  FS  + D+K++ ++ D+K  +  ++++ +
Sbjct: 328  VNWGDEVL-HSGLKQNYSISVAGGTEKTKAYFSLNYTDEKSMYENDDYKVYSTRVRIDQE 386

Query: 365  PNKRVALDFSVRYSNTTINGAGANESKSEVSSADSRMKDVMIYTPFNFKDLSDGYDPDLQ 424
             NK         + N  IN      S S  +S ++ ++  +  TP       DG   +  
Sbjct: 387  INK---------WMNAGIN---VQASFSNKNSRNAVLERALFATPLGTPYNEDGSITEFP 434

Query: 425  L------TNPLVSVADNARQQSRQTFN--YNGSFTWEFIDNLKFKTEFGLDHYYNKDKRF 476
            +       NPL    D   + + +      +    W+ +  L  K++ G  +  ++  +F
Sbjct: 435  IPGSSSDPNPLADEQDGVYKNNTKAGRAYVDAYLEWKPVKGLSVKSQLGGSYSQSRAGKF 494

Query: 477  YGVTTYNSRINGNNQPIAVFTSKERKTFRNTNTLNYDFKKILKNKDHSLSLL-------- 528
             G  +YN  + G+       T+K    ++  N + Y       NKDH L++         
Sbjct: 495  MGEGSYNV-LKGSTVAYGEATNKTGYNYKWENIVTY---HNTFNKDHDLTVTGVTSWNYN 550

Query: 529  VGQELIKVKSNTDTDEVRFYPKLFTADQAFN---LSSQGTAFSTDKFYNADDILLSYFAR 585
              +E      N  T+++ +Y      ++  N   L S+G               + +  R
Sbjct: 551  QSEEYYVYGENPATNDMLWYALQNADNKKLNSKYLMSKG---------------MGFIGR 595

Query: 586  ANYDFQGKYLASATFRADGSSKFSKDNRWGFFPSAALAWRMSSENFMESTKSWLDDLKLR 645
             NY ++GKYL SA+ R +  S+ SKDNRW  FP+ ++ WR+S E FM  TKSWLD+LKLR
Sbjct: 596  VNYSYKGKYLFSASSRYEADSRLSKDNRWNLFPAVSVGWRISDEAFMAGTKSWLDNLKLR 655

Query: 646  ISYGTAGNNNIPSDQTSTIWSAGSGASIGWMNNMSSYWTTGAQMANPDLKWETTHTRNAG 705
            + YG AG     ++ +S         S+G M   S+ +T    + N +L WE TH  N G
Sbjct: 656  VGYGVAGTTAGIAEYSSMASLENVTTSLGGMTVPSAKFT--EYITNRNLTWEKTHDLNIG 713

Query: 706  LDFTLLNGKLSGTVEYYWNTTKDLLIN--FPVSGVGY---SFQY---RNLGETENKGWEV 757
            +D + LN ++  TV+ Y   T D++++   P S +G    S  Y   +N  ETEN+G E+
Sbjct: 714  IDASFLNNRIDLTVDLYRTKTTDVILSQALPTSIMGNYTGSTTYKMNKNAAETENRGIEL 773

Query: 758  TLNWNAINKKNYALSFNANVGFNKNKVKSL--GSLMDYSADSGWASTDIQSDFKVQPGHS 815
             LN   I KK++  S       NK K+KSL  G  M ++A  G        D   + G  
Sbjct: 774  ALNTRNIVKKDFTWSSTVTFTANKEKIKSLIEGQDMMFNAKKG--------DMVFKVGEG 825

Query: 816  VGEIYGFVSDGRYEVSDFEGFI-------DGKWVLKAGVADASDIIGEKYLRPGAMKLKN 868
            VG  Y +   G ++ S+ E          D K  L +   D +   G  Y+ P   ++ +
Sbjct: 826  VGSFYRYKVLGIWQYSEKETAALFGCEPGDIKLDLPSVKKDGN---GYYYMNPEGERV-D 881

Query: 869  VDGSEDNKVTKD-DQKVIGDTNPFCSGGFSVNARVYGFDLTANFTYSIGNDIYNANKI-- 925
            +       V  D D++VIG   P  + GF  N R   FDL+  F Y+    + N   +  
Sbjct: 882  ITAENPYGVRADYDRQVIGRNTPDWTLGFKNNFRYKDFDLSV-FLYARWGQMMNYGSVIG 940

Query: 926  EYTSSSKYKYRNMIDVMAEEKRWTNLNADGTICNDPTQL---AAMNANTSMWSPWTQKYV 982
            +Y+ +  Y                    D TI  D   L      + + S +  +   Y 
Sbjct: 941  KYSPNPDYNIPTYFTYY-----------DKTIEADQDVLFYAIDKSKDRSAYEGYDSMYY 989

Query: 983  LTDWAVEDGSFLRLATLSIGYTLPQTLTRKVGIQNLRFYATGYNLFCIT---NYSGFDPE 1039
            +      DGSF +L  +++GYTLP  LT++ GI NLR YAT  NLF  +       +DPE
Sbjct: 990  V------DGSFFKLKNVTLGYTLPGKLTKRFGISNLRVYATMTNLFTYSPNKYVKNYDPE 1043

Query: 1040 VSTRTKSALTPGVDYSAYPRSRQYVIGLNLTF 1071
            ++               +P SR  + GLNLTF
Sbjct: 1044 MNGSIN-----------FPLSRDCIFGLNLTF 1064