Pairwise Alignments

Query, 619 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 564 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 111/480 (23%), Positives = 188/480 (39%), Gaps = 52/480 (10%)

Query: 47  LAEGTIKNIYIYYGEQNYRARYLPWYGYNTDIEWYSSSEQVGDG---KADLAVYKVSSNN 103
           L+EG+ +N Y    E       L +  Y  D E   ++E++ D    +  +  +   S N
Sbjct: 25  LSEGSSENWYSDETEITLALNDL-YRTYLWDFEINYNTERMSDNWTQRQAIDAFPAGSVN 83

Query: 104 SQMNLADGKEPWSNIYQGIEKANLAIQGL-RTYADLTDKNMAHLYGEALTMRAMAYVDLI 162
           S+ + ++  + W + Y+GI +AN  +  L      + +  +  L  EA  MRA+ Y  L+
Sbjct: 84  SEWSRSE--DLWLSTYKGITRANTILNSLDNATGKVAEAKIKQLAAEASLMRAVFYARLV 141

Query: 163 NAWGDVPARFEPTTTETMY-AARTDKDVIYKQLIKDLQEAENMVA---WPNEMDATT--- 215
             +GDVP        +  +   RTDK+V+ +Q+ KD   A   +      NE+   T   
Sbjct: 142 FYYGDVPFYTGYLNIDDAFELGRTDKEVVLQQVYKDFDAAIESLPVSYGSNELGRATKGA 201

Query: 216 -TVERINKAFVKG------LLARVCLQASGYSLRSDGN----SSLSSDPE----LAKSVL 260
               +   A   G        A+ C+    YSL  +      S   + PE    L +S  
Sbjct: 202 ALAFKARAALYMGDWVIARDAAKACMDLQVYSLHPNYGEYFLSKTRNSPETVFALPRSFE 261

Query: 261 YPIALQACKDVMAEEGKYVALKTNFEDIFIDNCRDIIKAGSESLW--EIPYNNEPTARGR 318
              +  A        G     + ++E      C D +      L+    P+ N       
Sbjct: 262 LGSSWGAKNFYTRTPGGSAVAQPSWELFCAYPCTDGLPIDESPLFNPREPFKNRDPRCAM 321

Query: 319 QVYTFGLRHETADVIVNYKQSGGQAGPTPFFFFDYSQKDKRRDVTCVPYKWNKGVQELNS 378
            +  FG  H    VI N         P P+         K  ++       NK  + +++
Sbjct: 322 TIVEFGTEH--LGVIYN---------PNPY-------ATKVLNMETEKMVANKDTRSVDT 363

Query: 379 IDKWYFGKLRYEWMNRYIESTDDGINKQYMRYADIVLMRAELENELNG-PASAAPYLKQI 437
              +    L+      + ++ +   + + MRYAD++LM AE + ELN   AS    +  +
Sbjct: 364 YASYNGLALKKGVDEDWSDNNETDFDIRIMRYADVLLMYAEAQIELNEIDASVLDAINAV 423

Query: 438 RQRAFDQADWNTEVDQYVAAVQGNKDAMFDAIVQERALEFCGEFVRKADLIRWNLLKTKL 497
           R RA+     NT    Y A    +++ +   +  ER +EF  E  R  DL+RW L +  L
Sbjct: 424 RARAYGVDVTNTTA--YPALTATSQEQLRKELRNERRIEFAWENRRFDDLLRWRLAEKAL 481