Pairwise Alignments

Query, 399 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 750 a.a., glycoside hydrolase family 88 protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 39/243 (16%)

Query: 164 WLDGLYMGAPFYAEYAFRNNRPQDYADVINQFITCARHTYDPKNGLYRHACDVSRTERWA 223
           W D LYM  P +A        P+       ++   A   +     L+       R ER+ 
Sbjct: 195 WADALYMAPPVFARMTAITGDPKYLTAADKEWRRTAARLWVEDEKLFL------RDERFK 248

Query: 224 DPVTGQS---KHCWGRALGWYAMALVDVLDFIPKHEAGRDSLLAILDNVAVQVKKLQDPE 280
           D     +   +  W RA GW    LV  L+ +P   AGR   + +   +A ++  LQ  +
Sbjct: 249 DENHRDADGDRIYWSRANGWVMGGLVRWLESVPVDFAGRAFYVDLFQKMAGRIAGLQQED 308

Query: 281 TGGWYQVMDRSGDKGNYLESSCSAMFIYSLFKAVRMGYID-PSYLDVAKAGYEGFLKNFI 339
             G ++      +     E+S S  ++Y+L   +  G +D  +YL     G+ G  ++ +
Sbjct: 309 --GLWRASLLDPEAYPEAETSGSVFYVYALAWGINHGLLDRDTYLPHVLKGWAGLNRHVL 366

Query: 340 EVDKDGVVTITKACAVAGLGGKVYRSGDYDYYINETIRNNDPK-----AVGPFIMASLEY 394
                            GL G   ++GD          + DP+     A G +I+A LE 
Sbjct: 367 ---------------ANGLVGAAQKTGDQPV-------STDPEDVGLYASGTYILAGLEV 404

Query: 395 ERL 397
             L
Sbjct: 405 ASL 407