Pairwise Alignments

Query, 495 a.a., D-galacturonate transporter ExuT (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 432 a.a., MFS transporter from Serratia liquefaciens MT49

 Score =  163 bits (412), Expect = 1e-44
 Identities = 115/421 (27%), Positives = 185/421 (43%), Gaps = 50/421 (11%)

Query: 5   RWTICAMLFFATTVNYLDRQVLSLTWDEFIKPEFHWDESHYGTITSVFSIVYAICMLFAG 64
           RW +  ++   T + YL R  +++     ++   H     Y  I + +S  Y +    AG
Sbjct: 8   RWYMIGLVTIGTVLGYLTRNAIAVAAPT-LEDTLHITTQQYSYIVAAYSACYTLMQPVAG 66

Query: 65  RFVDWMGTKKGFLWAIGVWSAGACLHAVCGIVTEAQVGLHSAAELAGATGDVVVTIATVS 124
             +D +GTK G+     +W+   C+                   LA + G + +      
Sbjct: 67  YVLDVLGTKVGYAMFAILWAL-FCM----------------GTALANSWGGLAL------ 103

Query: 125 MYCFLAARCILALGEAGNFPAAIKVTAEYFPKKDRAYATSIFNAGASIGALIAPLTIPIL 184
                 AR  + + EA   PA +K ++E+FP K+R+ A   FN G+SIG ++AP  +   
Sbjct: 104 ------ARGAVGMAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGGMLAPPLVVWA 157

Query: 185 AKAFGWEMAFIVIGGLGFIWMGFWVFMYDAPSKSKHVNKAELEYI---EQDQNEAGAGPK 241
             A  WEMAFI+ G L  IW   W+  Y  P   K ++  E EYI   ++ Q++ G    
Sbjct: 158 IVAHSWEMAFIITGVLSLIWAVCWLIFYKHPKDQKKLSDEEREYILGGQEAQHQTG---- 213

Query: 242 TEEKDEKKMRFWQCFSYKQTWAFVFGKFTTDGVWWFFLFWTPSYLNSQFGIKTSDPLGMG 301
               + KKM  WQ    +Q W     +F  +  W  F  W P ++   +G    +     
Sbjct: 214 ----NAKKMSAWQIVRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKAYGFNLKEIAMFA 269

Query: 302 LIFTLYAITMLSIYGGKLPTIFINKTGMNPYAARMKAMLIFAFFPLVVLLAQP--LGTF- 358
            +  L+A  +  I GG LP  F     +N   +R   + + A     VL+  P  +G F 
Sbjct: 270 WMPMLFA-DLGCIVGGYLPPFFQKHFKVNLIVSRKLVVTLGA-----VLMIGPGMIGLFT 323

Query: 359 SPWFPVILIGIGGAAHQSWSANIFSTVGDMFPRTAIASITGIGGMAGGIGSMILQKVAGN 418
           SP+  + L+ +GG AHQ+ S  + +   D+F R  +A+  G+ GMA    S +   V G 
Sbjct: 324 SPYAAIALLCVGGFAHQALSGALITLSSDVFGRNEVATANGLTGMAAWTASTLFALVVGA 383

Query: 419 L 419
           L
Sbjct: 384 L 384