Pairwise Alignments

Query, 495 a.a., D-galacturonate transporter ExuT (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 454 a.a., MFS transporter from Serratia liquefaciens MT49

 Score =  147 bits (372), Expect = 6e-40
 Identities = 117/427 (27%), Positives = 195/427 (45%), Gaps = 47/427 (11%)

Query: 2   TNYRWTICAMLFFATTVNYLDRQVLSLTWDEFIKPEFHWDESHYGTITSVFSIVYAICML 61
           T  R+ I ++LF  T +NY+DR  LS+   + I+ EF    +  G + S+F+  YA   +
Sbjct: 4   TKSRFFILSLLFIVTAINYMDRANLSVAGSK-IQSEFDLSATQLGLLFSMFTWFYAASQI 62

Query: 62  FAGRFVDWMGTKKGFLWAIGVWSAGACLHAVCGIVTEAQVGLHSAAELAGATGDVVVTIA 121
             G  +D +G++  +  AI +WS    L                     G     +   A
Sbjct: 63  PVGYVLDRIGSRILYGSAIILWSVFTFL--------------------MGFASHHLFATA 102

Query: 122 TVSMYCFLAARCILALGEAGNFPAAIKVTAEYFPKKDRAYATSIFNAGASIG-ALIAPLT 180
           T S    LA R ++ + EA +FP+  K+ A +FP  +RA AT+I+++   IG AL+ P  
Sbjct: 103 TASFLMLLACRALIGIAEAPSFPSNTKIIASWFPDHERARATAIYSSAQYIGLALLTPAL 162

Query: 181 IPILAKAFGWEMAFIVIGGLGFIWMGFWVFMYDAPSKSKHVNKAELEYIEQDQNEAGAGP 240
             ++A+ +GWEM+F + GG+G ++  +W+  Y  P  S   N+ EL+YI +     G G 
Sbjct: 163 SYVVAE-YGWEMSFYLSGGVGILFGIYWLLKYRDPQHSNSTNQQELDYIREG---GGYGS 218

Query: 241 KTEEKDEKKMRFWQCFSY----KQTWAFVFGKFTTDGVWWFFLFWTPSYLNSQFGIKTSD 296
           K +    +K+R W+  ++    +  W     +F      +FFL W   YL     +  + 
Sbjct: 219 KNQASVSEKVR-WRDIAFFLKNRTIWGLFIAQFACSSTLYFFLTWFIVYLEKGLHLPIA- 276

Query: 297 PLGMGLIFTLYAITMLSIY-GGKLPTIFINKTGMNPYAARMKAMLIFAFFPLVVLLAQPL 355
             G+G  F  Y + M  +  GG L  + + K     +A ++  M       ++ L+    
Sbjct: 277 KAGLGASFP-YLMAMAGVLCGGTLSDMLLKKGKSRTFARKLPVMSGLCLTMIICLV---- 331

Query: 356 GTFSPWFPVILIGIGGAAHQSWSANIFSTVG-----DMFPRTAIASITGIGGMAGGIGSM 410
             F    PVI I I   A   + AN FS +G     D+ PR  I ++ G   + G +  +
Sbjct: 332 -NFFEDQPVIAIAILSVA---FFANAFSNLGWVVWSDVIPRNFIGTMGGCLNICGNLSGI 387

Query: 411 ILQKVAG 417
           +   V G
Sbjct: 388 VSPIVIG 394