Pairwise Alignments

Query, 1124 a.a., DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1569 a.a., DUF3320 domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score = 48.9 bits (115), Expect = 3e-09
 Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 58/292 (19%)

Query: 830  FDVAIVDEATQILEPQLLGILCAKGENGKEGVGKFILIGDHKQLPAVV----LQNTEQSE 885
            FD+ ++DEA+Q+     LG +    +         +++GD KQLP       L + E  +
Sbjct: 948  FDLLVIDEASQVRPEDALGAIARARQ--------IVVVGDQKQLPPSSFFDRLLDDEADD 999

Query: 886  VYDEALSA--------VGLKNLKDSLFERLYRTARQHTDAHRTYDMLCRQGRMHPEVALF 937
              DE   A        VG      SL E     +R     +R+ D         P +   
Sbjct: 1000 DADEEAEADLLGGAAKVGSMESILSLCEARGIGSRMLQWHYRSRD---------PSLIRM 1050

Query: 938  ANQAFYE-GRLLPVGLPHQLEDSGNINRLSFYPSRPEPMGSSAKTNHSEAKIAARLAATV 996
            +N+ FY+ G +LP   P  L++      L F            + N  E +      A  
Sbjct: 1051 SNREFYDDGLILP---PSPLQNDPAFG-LCFTRVDGVYDKGGKRDNRKEGEAIVGRVAQH 1106

Query: 997  YKEHSEAFDASRTLGIITPYRSQIALIKKEIEV-----------LGISELNQILIDTVER 1045
             + H E      +LGI+T   +Q  LI + +E+           L   +   + +  +E 
Sbjct: 1107 ARMHPEL-----SLGIVTFSSTQKNLITELLELARRSDAALDAFLREGQAEDVFVKNIEN 1161

Query: 1046 FQGSERDVIIYSFCVNYPYQLKFLSNLT-----EEDGILIDRKLNVALTRAR 1092
             QG ERDVI+ S C         L+++T      E G   +R+LNV  TRAR
Sbjct: 1162 VQGDERDVILVSVCYGPATPGGRLASMTFGPVNMEGG---ERRLNVLFTRAR 1210



 Score = 28.9 bits (63), Expect = 0.003
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 8/83 (9%)

Query: 37  LCRLHMHNGSLQMTDLSARISF-----VAAKVGLSVAEQNRLHTFRLTSNAILNRQQEPT 91
           L RLH    S  +TDL+ R+        AA V L  A   RL    L S+ +L       
Sbjct: 798 LTRLHQRLASTGLTDLAQRMRTGEFDPAAAAVELRFARAERLWRVALDSSPVLPDMGLEK 857

Query: 92  REHLLRDAKTLAFFIRKLFEEDI 114
           R  L+   +T A   RK   E++
Sbjct: 858 RHELV---ETFALLERKRLSENV 877