Pairwise Alignments

Query, 904 a.a., TonB-dependent receptor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 715 a.a., TonB-dependent receptor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.0 bits (175), Expect = 1e-16
 Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 21/259 (8%)

Query: 1   MKKLFLLRFSVAAFFCLLCVLPALAANIKIKGAVKDKLSKEPLIGATIRLVGTPAGAVTD 60
           MK  F+    + +F  + C   A  +   I G V D  + EPL GATI + G   GAVT 
Sbjct: 1   MKPTFIASILIFSFI-VTCSTFAQQSTEHISGRVTDT-NGEPLPGATISIKGEETGAVTS 58

Query: 61  MDGNFELNSTGVLEGLYDIEIKYVGYKTEVRRKVRVENGKLAILNLELETDAHELSDVVV 120
           +DG + L   G+  G Y I   Y+GY+TE ++++  E GK   +N  L  D  +L  VVV
Sbjct: 59  VDGTYTLQLPGI--GSYIITASYIGYQTE-QKRITTEKGKK--VNFSLSEDQFDLGTVVV 113

Query: 121 VAKKNRENENMLLLEQQKAVIAVQAVSVKELSRKGVSDAEGAVTKVAGVS---KQDGVKN 177
              +  +    LL +       + +  +K+++   V+D     T++ G+      D    
Sbjct: 114 TGTRTPK----LLKDAPIITRVITSDDIKKVNANNVADL--LKTELPGIEFSFSMDQQTA 167

Query: 178 VFVRGLGDRYNATTFNGFAVPSEDPEYKNISLDFFGTDIIQSVGVNK--AFNAGGISDVG 235
           + ++G G        +G  +  E     N+  +    D ++ + + K  A    G S +G
Sbjct: 168 INMQGFGGNSVLFLVDGERLAGE--TLNNVDYERLNLDNVERIEIVKGAASTLYGSSAIG 225

Query: 236 GATIDIVSKELIGSGNLNI 254
           G  I+I+++E     NLN+
Sbjct: 226 G-VINIITRESDDPWNLNL 243



 Score = 29.6 bits (65), Expect = 7e-04
 Identities = 57/280 (20%), Positives = 100/280 (35%), Gaps = 30/280 (10%)

Query: 571 NIDKYSVAK--NIHSAYAEATYQFTPRWIVNVGMKYDNVDIQVDYNVNKGGSEGSNTIQK 628
           N+D Y+V    +  + +    + F  R I    ++   +  +V Y   +    G    + 
Sbjct: 276 NVDTYAVDNPGDFSTVFGSRVWNFKERLIYRP-LETLKLTGRVGYYFRERNKPGDTQDRY 334

Query: 629 DFFLPSLNLKYNLSEKHSLRLGASKTYTLPQAKEISPYRYV---GVNFNSQGNANLKPSD 685
             F   +   Y  +   +L +G    YT  Q  + S Y+ +    V   S    N+    
Sbjct: 335 RGFSGGMKANYTFNIMSNLEVG----YTFDQYDK-SDYQSLYKNDVRDYSNVQHNVHALY 389

Query: 686 NYNVDLKWDFNPTPTELISLTAFYKLIKNPISRIEVASAGGYLSYENIADKATVAGVEVE 745
           NY  + K         L      Y+   N    +  A A G   +        +AG+  +
Sbjct: 390 NYTFNGKHTLTVGADYLRDYLMSYQFTDNADHTMHTADAFGQFDWNPTERLNVIAGLRFD 449

Query: 746 VRKNLFVRPLSSAANGMNKL-SFGLNGSY--------------IYTNAKMPLATVTTGSQ 790
              +  VR LS     M K+ +  L GSY              ++  A M +       +
Sbjct: 450 YFSDSNVRHLSPHLGMMYKIGNCSLRGSYSQGFRSPTLKEMYMVFNMANMMMIYGNPDLK 509

Query: 791 LEGAAPWIANFDLSHNFTKGTHSFINTLVFNYVSDKIYTI 830
            E +     NF +S  +TK  ++F  T  +N V ++I T+
Sbjct: 510 SETSH----NFSVSAEYTKSRYNFSITGYYNLVHNRINTV 545