Pairwise Alignments

Query, 370 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 409 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  119 bits (297), Expect = 2e-31
 Identities = 87/359 (24%), Positives = 161/359 (44%), Gaps = 18/359 (5%)

Query: 4   KKQTFNVLFWIRKGRTNEK-MSPLSCRVTISGQRYEIPTKLHLRSESWSAVAQKSLGKTA 62
           K + F VL +++K   ++   +P+  R+T++    +   KL    E W+A   +  GK+ 
Sbjct: 2   KVEKFKVLLYLKKSEPDKNGKAPIMGRITLNRTMAQFSCKLSCTPELWNARESRLNGKSR 61

Query: 63  NDKEVNRYIEDLKITIEDTIAKIRQKSYPLNIENFKLMFQTQDNEFSTISTLFDYHEIME 122
              E N  IE L + +      + ++    +    + MFQ       T+  L D H    
Sbjct: 62  KAVETNEKIERLLLAVHSAFNSLMERKKDFDAAAVRDMFQGNAGIQMTLLKLLDRHNGEM 121

Query: 123 KKNLRT----STFIGYHVTKKHLLNFIRIKYHVSDYDLAAVDKAFVYEFYAYLQGYRREG 178
           K  +      +T   Y  T + L  FI+ K+ VSD     +++ F+ ++  ++     +G
Sbjct: 122 KARVGVDRAPTTLSTYLFTYRTLSEFIKAKFKVSDLAFGQLNEQFIRDYQDFI--LMEKG 179

Query: 179 DTVCAVNGALKHIQRFKKVMNVALQNEWISRNPVCLLNAKKTKVERG-FLSEKELKSLEE 237
             V  + G L  +   KK+  +A +     +   C     K K      LS +  + L +
Sbjct: 180 HAVDTLRGYLAIL---KKICRIAYKEGHSEKYHFCHFKLPKQKESTPKALSRENFEKLRD 236

Query: 238 VPLPANLS---IVRDVFIFAVYTGLSYVDIENLTNENINVGIDKSLWLSYYRQKTDIHAI 294
           + +P       I RD+F+FA YTG +Y D+ ++T EN+    + +LWL Y R+KT+    
Sbjct: 237 LEIPEKRRSHVITRDLFLFACYTGTAYADVVSITRENLFTDEENNLWLKYRRKKTNYLGR 296

Query: 295 LPLLQPAVNILKRYEAYHEGKRNNHIFPVPLNQVMNRYLKKVAKQAGVDKNITFHCARH 353
           + LL  A+ ++++Y           +FP      +   +K +   AG+ +++ +H ARH
Sbjct: 297 VKLLPEALVLIEKY----RDDARMTLFPPQDYHTLRANMKSLRLMAGLSQDLVYHTARH 351