Pairwise Alignments

Query, 1135 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1046 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  407 bits (1045), Expect = e-117
 Identities = 319/1080 (29%), Positives = 509/1080 (47%), Gaps = 120/1080 (11%)

Query: 122  TQQQQKVTGKVVD-ANNEPLIGVSVLEKGTTNGTITDFDGNYTLVVTGSNAVLQFSYVGY 180
            +Q  + VTG V D A  +PL GV+VL KG+T G  T  +G Y++ V   +  L F ++GY
Sbjct: 21   SQGARTVTGTVTDEATGQPLPGVAVLVKGSTIGVTTGAEGVYSINVPEGSNTLVFRFLGY 80

Query: 181  QTLERAVAGKTAINITLKEDAQVLDEVVVTALGIKRSEKALSYNVQQVNADAVTTNKDPN 240
              +ER +     IN+ +  DA+ L EVVVTALG K  E+ L Y  QQ+N  ++T  ++ +
Sbjct: 81   ANVERQIGNAATINVAMGIDAEQLQEVVVTALGRKEEERTLGYATQQINEQSITQGRERS 140

Query: 241  FINSLSGKVAGVNINASSSGVGGVSKVVMRGTKSIMQSSNALYVVDGVPMYSNA-----N 295
             +NSL GKVAGVNI +   G G  S+VV+RG KSI QS+ AL+V+DG+P+ +++     N
Sbjct: 141  VVNSLQGKVAGVNIQSQGGGPGSSSRVVIRGAKSISQSNQALFVIDGIPVDNSSSGTGDN 200

Query: 296  KVNGTEFSSKGNTEPIADINPEDIESMSVLTGAAAAALYGSDAANGAIIITTKKGKEGR- 354
               G +  ++ N     DINP+DIES+++L G AAAALYG+ AANG I+ITTK G+    
Sbjct: 201  LNAGVDVGNRAN-----DINPDDIESINILKGPAAAALYGARAANGVIMITTKSGRGATK 255

Query: 355  -VNITVNSNVEFNAPLVMPRFQTRYGTGIGGVKDDNSSRSWGPKLT------------EA 401
               +T  ++      L  P  Q RYG G  G  D   + SWGP  T            + 
Sbjct: 256  GAEVTFITSYTVEDILRYPELQNRYGQGFFGAPDLLENTSWGPIFTGELLPWGQVVNGQQ 315

Query: 402  RYFGYNPRDD----YFQTGVIGTESVSFSTGSEKNQTYASAAAVNSKGIVPNNKYDRYNF 457
            R   Y   +D    +F  G   T +VS S   E    YAS +    +G+VP  +YDR++ 
Sbjct: 316  RVKPYVALEDNVEEFFNYGYNWTNTVSLSGAGENATYYASYSNTQQEGVVPTTEYDRHSL 375

Query: 458  NVRNTTSFLDDKMTLDVNASYILQKDRNMVNQGTYNNPLVGAYLFPRGNDWEDIKMYERY 517
             V+ T   L +K+T +V+ +Y  +   +    G  N+        PR     DI + E  
Sbjct: 376  AVKGTAK-LANKITSNVSLTY-TKSGGDFALTGQGNSVFNQIIQTPR-----DIPILELE 428

Query: 518  DVARKIYTQYWPTGDGNMTMQNPYWVNYRNLRENKKDRYMLGASLNYQILDWLNVSGRVR 577
            D+           G  +    NPYW       EN  DR      + Y+I++ LNV+ R+ 
Sbjct: 429  DLDSPFNDD---AGFYSPYTINPYWSLRNQTYENDVDRLFGNIQIGYEIIEDLNVTYRIG 485

Query: 578  LDNSNNDYTEK-----AYASTNTQLTELSDRGLYGISRSYEKQLYADFLVSVNKTFGEKW 632
             D     YT++     A      Q    +D GLY   + Y +++ +D +V+ ++   E+ 
Sbjct: 486  TD----FYTDRRKQFSAIRDVEGQNASNNDNGLYAERQIYYREVNSDLIVTYSRDLSEEL 541

Query: 633  SLQANMGGSFTDMRYDEMAVRGPIADDSKTFAGEKAGLTNGFYIQNLSTTKTSKMQSGWR 692
            SL+  +G +      D++             A   A   N F  ++LS    + +  G+R
Sbjct: 542  SLELLVGQNVNQRINDDLT------------ATADALANNEF--RSLSNIIGTPLTVGFR 587

Query: 693  EQTQ--SIYASAEVGYQSTYYLTLTGRNDWPSQLAGRNSVNKSFFYPSVGMSVVLSELMP 750
            +  +   +Y SA++GY++  +L +TGRNDW S L      + SFFYPSV ++   +E   
Sbjct: 588  DMRRLIGVYGSAKIGYRNFVWLEVTGRNDWSSTLP---LDDNSFFYPSVNLAFDAAEAFG 644

Query: 751  KLNKDYLSYWKIRGSFASVGTAFERYIANPLF-AWNTSIGQWSNLTDFPV---------- 799
                   ++ KIR ++A+VG     Y    +F + N S G      +FP           
Sbjct: 645  LAENTPFNFAKIRANYANVGNDALPYSTRSVFVSGNISDGFAGTDLNFPFAGLPGFEVSN 704

Query: 800  ----YDLKPERTNSFEVGMNMR-FLKNFELDVTYYNAKTMNQTFNPELPVGE-YARIYIQ 853
                 +L+PE T+S+EVG+++R F + F +D  YYN+++ +Q  N  L     Y   ++ 
Sbjct: 705  VIGNANLEPENTSSWEVGVDLRMFNERFRVDAAYYNSESTDQIINVPLSYATGYGSAFLN 764

Query: 854  TGAVRNQGLELAL-NYNNTWKDFTWNTGVTYSMNKNKILTLADNAINPITREKFSISSLN 912
               +RN+G+EL +        DF+W+  V ++ N+N +  ++ +            + ++
Sbjct: 765  AATIRNEGVELLVGGVPIETNDFSWDISVNFTKNENNVEDVSGD------------NEIS 812

Query: 913  MGGLGSTRFILKEGGSMGDIYSLMDLKRDANGAVYIDENNSVVTESLEANNYIKLGSVLP 972
            +GGL S   ++ EG   G  +   D  RD  G + +   N+       A      G++ P
Sbjct: 813  LGGLSSAALVISEGRPYG-TFLAEDYLRDPQGRIVV---NASTGRPRLATEQTYQGTIQP 868

Query: 973  KGNLAWRNNFSWKNINVAFLVSARLGGVVFSRTQAVLDNFGVSEASAAARDKGYVSVNGN 1032
                   N F +K + +A +   R GG ++SRT+      G +  +     + ++  N  
Sbjct: 869  DWTGGLVNTFKYKGLRLAVVFDTRQGGKIYSRTRGTQRFAGTAPETLFNDRQPFIIPNSV 928

Query: 1033 DRVNPEGWYSVVAGGTAVPQYYIY-------SATNI------RLQEASIGYTIPRKWLGN 1079
             +V     Y  V   T +    +Y         TNI      +L+E S+ Y +P   +  
Sbjct: 929  VQVGNTDEY--VENTTPLTNANLYDYWGNLPEGTNIIDASFTKLREVSLSYRLPESVVNK 986

Query: 1080 VC--DIKVSLIGRN--LWMIYNKAPFDPESVASTDNFYQGIDYFMMPSLRNIGFNLSFKF 1135
                +I+V + GRN  LW        DPE  +  +   QG ++   PS R+ G N+   F
Sbjct: 987  TFFGNIEVGVTGRNLVLWTPDENTYIDPEVNSLGNGNLQGYEFSSYPSTRSWGANIRVTF 1046