Pairwise Alignments

Query, 1135 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1076 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  422 bits (1085), Expect = e-122
 Identities = 339/1083 (31%), Positives = 515/1083 (47%), Gaps = 134/1083 (12%)

Query: 128  VTGKVVDANN-EPLIGVSVLEKGTTNGTITDFDGNYTLVVTGSNAVLQFSYVGYQTLERA 186
            V G+VVD+ +  PL GVS+   G   G +T+ +G++ L V    A L F+Y+GY+     
Sbjct: 53   VEGRVVDSEDGSPLPGVSIAANGKPVG-VTNLEGHFKLDVE-KGAKLSFTYIGYRPTSVT 110

Query: 187  VAGKTA-INITLKEDAQVLDEVVVTALGIKRSEKALSYNVQQVNADAVTTNKDPNFINSL 245
            V    A +++ L+ D Q L EVVVTALGIKR EK+L Y + +V+ D ++     N++N L
Sbjct: 111  VNQPEANLSVQLETDNQQLSEVVVTALGIKREEKSLGYALTKVSGDEISKTAPTNWMNGL 170

Query: 246  SGKVAGVNINASSSGVGGVSKVVMRGTKSI-MQSSNALYVVDGVPMYSNANKVNGTEFSS 304
            +GKV G+N+ ++ +G GG  ++V+RG  S+ M    AL VVDGVP+   A   +G  + S
Sbjct: 171  AGKVPGLNMTSAGAGPGGSVRLVLRGQNSLDMSKGEALIVVDGVPINGGAQGNSGQGYMS 230

Query: 305  KGNT----EPIADINPEDIESMSVLTGAAAAALYGSDAANGAIIITTKKG-KEGRVNITV 359
              ++       +DINPEDIES+SVL GA+A ALYGS A  GAI+ITTK G K+  + ITV
Sbjct: 231  DESSVDYGNGASDINPEDIESVSVLRGASATALYGSRAGAGAIVITTKSGQKKKGLGITV 290

Query: 360  NSNVEFNAPLVMPRFQTRYGTG-----------IGGVKD---DNSSRSWGPKLTEARYFG 405
            +S+   +  L  P +Q+ YG G            G  +D   + S+ +WGPK     Y+ 
Sbjct: 291  SSSAAIDDVLRWPDYQSEYGQGQRSEAKHYYYSYGKTEDGASNISTHTWGPKFDGQLYYQ 350

Query: 406  YNP------------------RDDYFQTGVIGTESVSFSTGSEKNQTYASAAAVNSKGIV 447
            Y+P                    D+F+TG   T SVS   G EKN    S   + +K I+
Sbjct: 351  YDPVTNQVGAERTPWVGDENYIKDFFRTGTTFTNSVSLRGGDEKNSYSLSFTDLRNKYII 410

Query: 448  PNNKYDRYNFNVRNTTSFLDDKMTLDVNASYILQKDRNMVNQGTYNNPLVGAYLFPRGN- 506
            PN  ++R   +V  ++S   +K  ++   +Y  +   N+   G  +   + A ++   N 
Sbjct: 411  PNTGFNRN--SVALSSSHDLNKFQINTKINYYNKNSDNLPLAGYSSRSFMYAMIWTHPNI 468

Query: 507  --DWEDIKMYERYDVARKIYTQYWPTGDG--------NMTMQNPYWVNYRNLRENKKDRY 556
              DW               Y  YW  G+         N  + NP++  Y NL    K R 
Sbjct: 469  PVDW---------------YRNYWEPGEEGLVQNNQLNGNLDNPFFSLYENLNTVDKKRI 513

Query: 557  MLGASLNYQILDWLNVSGRVRLDNSNNDYTEKAYASTNTQLTELSDRGLYGISRSYEKQL 616
                S+ Y   D L++  R  LD  +   T +   S     +  S  G Y    +   ++
Sbjct: 514  FGNLSVTYSFNDKLSLMLRSGLDMDDELRTSRRAVS-----SVASPNGWYKEQVTGTTEI 568

Query: 617  YADFLVSVNKTFGEKWSLQANMGGSFTDMRYDEMAVRGPIADDSKTFAGEKAGLTNGFYI 676
              DF++  ++  G+K  L   +GG+    ++            + T   E+      + +
Sbjct: 569  NNDFMLKYDEKLGDKIGLSLTVGGNNMSRKW-----------KNNTAIAERLNFPGIYKL 617

Query: 677  QNLSTTKTSKMQSGWREQTQSIYASAEVGYQSTYYLTLTGRNDWPSQLAGRNSVNKSFFY 736
             N S  +       + ++  S+Y  A+  Y S  ++ +TGRNDW S L    S N S+FY
Sbjct: 618  AN-SQDRPYISNKRYEKELNSLYGLAQFSYGSKIFVDVTGRNDWSSTLP---SGNNSYFY 673

Query: 737  PSVGMSVVLSELMPKLN---KDYLSYWKIRGSFASVGTAFERYIANPLFAWNTSIGQWSN 793
            PSV  S VLSEL    +    + LS+ K+R S A VG   + +     ++ N   G ++N
Sbjct: 674  PSVNTSFVLSELFDFSSIGLLNSLSFAKLRASIAQVGNDTDPFQTQRYYSANEIGGSYTN 733

Query: 794  LTDFPVYDLKPERTNSFEVGMNMRFLKN-FELDVTYYNAKTMNQTFN-PELPVGEYARIY 851
             T  P  DLKPE   S EVG+++RF  N   LDVTYYN+ T NQ    P  P   Y    
Sbjct: 734  PTVLPNLDLKPEMITSREVGLDVRFFSNRIGLDVTYYNSDTKNQIIAVPTDPASGYYSRM 793

Query: 852  IQTGAVRNQGLELALN---YNNTWKDFTWNTGVTYSMNKNKILTLADNAINPITREKFSI 908
               G + N G E+  N    +N    F WNT  T+S NKN+++ LA+     I       
Sbjct: 794  FNAGLINNSGWEIGFNAIPVDNA--AFKWNTYATWSKNKNEVVELAEGVETII------- 844

Query: 909  SSLNMGGLGSTRFILKEGGSMGDIYSLMDLKRDANGAVYIDENNSVVTESLEANNYIKLG 968
              L+ G  G  +  +  GG++GDIY    L R  +G V  DE+   V +    N     G
Sbjct: 845  --LSQGPRGYVQATV--GGTIGDIYG-AGLARTPDGQVIYDESGYPVLD----NELKYQG 895

Query: 969  SVLPKGNLAWRNNFSWKNINVAFLVSARLGGVVFSRTQAVLDNFGVSEASAAARDKGYVS 1028
            S +P    +W N F++KN++ +FL   +LGG V+S T ++L   G  + +   R  G   
Sbjct: 896  SSIPDWKASWGNQFTYKNLSFSFLFDGQLGGKVYSLTHSMLAYSGKLKKTIPGRYDGL-- 953

Query: 1029 VNGNDRVNPEGWYSVVAGGTAVPQYY---IYSATN----------IRLQEASIGYTIPRK 1075
            +    +VN +G Y      T    +Y   +Y   N          I+L+EA + + +P++
Sbjct: 954  IGEGVQVNADGSYRPNDVRTKDISFYYNALYQRDNVEMNTFDTSFIKLREARLQFALPKR 1013

Query: 1076 WL-GNVC-DIKVSLIGRNLWMIYNKAPFDPESVASTDNFYQ-GIDYFMMPSLRNIGFNLS 1132
            W   N+  +  VS+ GRNL +  +   FDPE     D   + G +   +PS R  G NL+
Sbjct: 1014 WFRANILQNATVSVYGRNLLLFTDFPSFDPEVATLNDGRIEPGFETAQLPSTRTFGTNLT 1073

Query: 1133 FKF 1135
              F
Sbjct: 1074 LSF 1076