Pairwise Alignments

Query, 1135 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1040 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  416 bits (1070), Expect = e-120
 Identities = 329/1074 (30%), Positives = 518/1074 (48%), Gaps = 106/1074 (9%)

Query: 118  STKSTQQQQKVTGKVVDA-NNEPLIGVSVLEKGTTNGTITDFDGNYTLVVTGSNAVLQFS 176
            +T++  Q+  V+GKV  A     L GVSV+ KGTT GT TD +G+Y + V   NA L F 
Sbjct: 17   ATRALAQEDLVSGKVTGAAEGMALPGVSVIVKGTTTGTTTDANGDYQIRVPDDNATLVFR 76

Query: 177  YVGYQTLERAVAGKTAINITLKEDAQVLDEVVVTALGIKRSEKALSYNVQQVNADAVTTN 236
            ++GYQ+ E  V  +  +N+ L  D+Q LDEVVVTALGI R +KA+ Y  QQV  + +  N
Sbjct: 77   FLGYQSREVPVGSQRVLNVQLSTDSQQLDEVVVTALGITREKKAIGYASQQVETEELVQN 136

Query: 237  KDPNFINSLSGKVAGVNINASSSGVGGVSKVVMRGTKSI--MQSSNALYVVDGVPMYSNA 294
            + PN +N++ GKVAGV I+++    G  + + +RG  SI   + +  L+V+DG+ M  N+
Sbjct: 137  RQPNVLNAMQGKVAGVTISSTGGAPGQGTSIQIRGINSIDPTRPNQPLFVIDGILM-DNS 195

Query: 295  NKVNGTEFSSKGNTEPIADINPEDIESMSVLTGAAAAALYGSDAANGAIIITTKKGKEGR 354
                G     +G +  +AD+NP DIES+++L G AA ALYG    NG ++ITTK G++G 
Sbjct: 196  TSTFGQGTELRGMSNRLADLNPNDIESINILRGGAATALYGLQGVNGVVVITTKSGRQGE 255

Query: 355  VNITVNSNVEFNAPLVMPRFQTRYGTGIGGVKDDNSS-RSWGPKLTEARYFG-------Y 406
            + +   S          P  Q  Y  G  G  D  S   SWGP + EAR          Y
Sbjct: 256  MRVNFTSTAGIEEVNKFPDIQDTYTQGYAGEYDPTSFWPSWGPTVAEARQLDPTHPDELY 315

Query: 407  NPRDDYFQTGVIGTESVSFSTGSEKNQTYASAAAVNSKGIVPNNKYDRYNFNVRNTTSFL 466
            N  +D ++ G     ++SFS G E    + S + +  +G++P   Y   +  + N  + +
Sbjct: 316  NHIEDAYERGHQFRNTISFSGGGEALSFFTSLSHLTHEGVLPFTDYQNVSARL-NAEARV 374

Query: 467  DDKMTLDVNASYILQKDRNMVNQGTYNNPLVGAYLFPRGNDWEDIKMYERYDVARKIYTQ 526
             DK+ +  N +YI     N  N   +N  L  +Y  PR   W D+  Y + D     Y  
Sbjct: 375  SDKIKIGGNFNYI-NSGGNRYNADRFNEML--SYWSPR---W-DVTDYVKPDGTMNTY-- 425

Query: 527  YWPTGDGNMTMQNPYWVNYRNLRENKKDRYMLGASLNYQILDWLNVSGRVRLDNSNNDYT 586
                  GN    NP +    N  E++ +R++ G +  Y   DWL  S R+ LD  ++D T
Sbjct: 426  ------GN---DNPIYAAATNQLEDEVNRFIGGLTFGYTPTDWLTFSYRIGLDTYSDDRT 476

Query: 587  EKA---YASTNTQLTELSDRGLYGISRSYEKQLYADFLVSVNKTFGEKWSLQANMGGSFT 643
              A       + Q+ E +D G      +  + + + F+ ++NK FGE +S    +G    
Sbjct: 477  RTAPGPRGLPDEQVLEDNDLGFVHEYTTRFRAINSTFIATLNKDFGEDFSGTLRLGHDLY 536

Query: 644  DMRYDEMAVRGPIADDSKTFAGEKAGLTNGFYIQNLSTTKTSKMQSGWREQTQSIYASAE 703
            D +     V            GE+  + + F + N     T + +  +R     I+A A 
Sbjct: 537  DRQAKSFGV-----------VGEELAVFDYFRLSNARFLSTEEEEIEYR--LMGIFAEAS 583

Query: 704  VGYQSTYYLTLTGRNDWPSQLAGRNSVNKSFFYPSVGMSVVLSELMPKLNKDYLSYWKIR 763
            + Y+   +LTLTGRND  S LA   S N+SFFYPS  +S + SE +      +++  K+R
Sbjct: 584  LDYKDFLFLTLTGRNDITSSLA---SSNRSFFYPSASISYLFSEHLEL--PAFINQSKLR 638

Query: 764  GSFASVGTAFERYIANPLFA-WNTSIGQWSNLTDFPVY---DLKPERTNSFEVGMNMRFL 819
             S+A +G   + Y  +  FA + T    ++ +T   +     LKPE TN+FE G+ M FL
Sbjct: 639  LSYAQMGKDAQPYSISSGFAPYPTLPTGYTGVTRDELLGNPGLKPEYTNTFEAGLEMAFL 698

Query: 820  KN-FELDVTYYNAKTMNQTFNPELP-VGEYARIYIQTGAVRNQGLELALNYNNT-WKDFT 876
             N    DVTYY + + +Q  N  +     Y    I  G +RN+G+EL LN       +FT
Sbjct: 699  DNRIGFDVTYYYSISKDQILNINVANTTGYILSAINAGEMRNKGIELVLNATPVRTNNFT 758

Query: 877  WNTGVTYSMNKNKILTLADNAINPITREKFSISSLNMGGLGSTRFI-LKEGGSMGDIYSL 935
            W+T + +S N NKIL + +     +   +F       G +GST  + L EG   G+IY  
Sbjct: 759  WDTKLIFSANDNKILEIPEGLDEIVYASQF-------GYVGSTVTLKLVEGQPYGNIYG- 810

Query: 936  MDLKR-------------DANGAVYIDENNSVVTESLEANNYIKLGSVLPKGNLAWRNNF 982
               KR             D +  + I EN   V   L +     LG+  P     + N F
Sbjct: 811  THWKRYYGPGEEEDPRFVDESRPIVIGENGFPVRAPLASQKI--LGNSQPDWIGGFTNTF 868

Query: 983  SWKNINVAFLVSARLGGVVFSRTQAVLDNFGVSEAS---------AAARDKGYVSVN--- 1030
            ++KN+++  L+ AR+G   +++       FG++E +             + G  +     
Sbjct: 869  TYKNLSLTALLDARVGQEKYNQMDNFFAAFGIAEYTENRNQTVVFPGVLEDGTPNTKEVW 928

Query: 1031 -----GNDRVN-PEGWYSVVAGGTAVPQYYIYSATNIRLQEASIGYTIPRKWLGNVC--D 1082
                 G D V+   G+Y     G  V + ++  A+ +RL+  ++ Y++P+KW  ++   +
Sbjct: 929  LGQGVGPDGVDYGNGYYRNYYRG--VSENFVEDASWVRLRSLTLNYSLPQKWFESIFIRN 986

Query: 1083 IKVSLIGRNLWMIYNKAPFDPE-SVASTDNFYQGIDYFMMPSLRNIGFNLSFKF 1135
              VSL G NLW+  +   +DPE S + + +   G   F  P++R+  F L+  F
Sbjct: 987  ASVSLTGNNLWLSTDYKGYDPETSFSPSGSNVDGFSGFTYPAVRSYLFTLNVGF 1040