Pairwise Alignments

Query, 264 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 288 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  109 bits (272), Expect = 7e-29
 Identities = 71/257 (27%), Positives = 128/257 (49%), Gaps = 11/257 (4%)

Query: 11  SNIQSALVVYCFSGKAKLNVYDDSHWIQPQELIILLPGQFVSFTEASDDFLTTTLVVSPT 70
           S I      +C  G+ ++ + D S+ I    + I + G  +     S D     L V   
Sbjct: 26  STIDKCGFFFCQKGEVEVALNDKSYLISKGSVCIYMTGSLLRIQRISKDIKGIMLEVDLN 85

Query: 71  MFSDALSGVPRFSPHFFFYMRTHYWYPQTENDTRRLMNFFGMVKDK--VTSNDI--YRRE 126
                ++ +   +     Y+R +  +  TE     L      ++ +  + ++DI   R+ 
Sbjct: 86  YIIPIVNKI--VNSENLLYLRENPCFSITEYQYNYLEQLIKALQQRMDIKAHDIPLQRQH 143

Query: 127 LIIHLLRY----LYLELFNAYEKEASLMTTRKDTRKEELANKFFGLIMKHFKENKDVAFY 182
           LI  L++     L  EL N Y     L    +D +K+++   F   + +++++ +DV FY
Sbjct: 144 LISELIKSWGQTLCYELLNVYFTNQPLKPLSQD-KKDKIFQNFVITLFRYYQQERDVTFY 202

Query: 183 ADKLCITSKYLTMVIKEVSGKSAKDWIVEYIVLEIKALLKNTNMNIQEIAVKTNFANQSS 242
           A K  ++S+Y + VIKE SG +A  WIV+ ++ E K LL+N+++ I+EIA K NF  QS 
Sbjct: 203 ASKQYLSSRYFSAVIKEKSGSTALQWIVQMVITEAKQLLENSDLTIKEIATKLNFPTQSF 262

Query: 243 LGRFFRKHTGMSLSQYR 259
            G++F+++ G+S  +YR
Sbjct: 263 FGKYFKQYVGVSPKEYR 279