Pairwise Alignments

Query, 598 a.a., putative chloride channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 418 a.a., voltage-gated ClC-type chloride channel ClcB from Escherichia coli ECOR27

 Score =  137 bits (344), Expect = 1e-36
 Identities = 110/439 (25%), Positives = 196/439 (44%), Gaps = 44/439 (10%)

Query: 28  LILSFLVGIFTAIAALFLKFLIHQIQNFLTNNFNATSAN-------YLYLVYPVIGIFLA 80
           L+++ +VGI  A A    +  +  ++    NN + +  N       +  L+ P +G   A
Sbjct: 5   LLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALGGLAA 64

Query: 81  GWFVRNIVK--DDISHGVTKILYAISRRQGRIKRHNIWSSTIASAITIGFGGSVGAEAPI 138
           G  +    K      H  T  + A+ +  G+         ++AS + +  G ++G E  +
Sbjct: 65  GLLLMGWQKFTQQRPHAPTDYMEAL-QTDGQFDYAASLVKSLASLLVVTSGSAIGREGAM 123

Query: 139 VLTGSAIGSNLGSVFKMEHRTLMLLVGCGAAGAIAGIFKAPIAGLVFTLEVLMIDLTMSS 198
           +L  +   S     F    +   L + CGAA  +A  ++AP+AG +F  EVL   + ++S
Sbjct: 124 ILLAALAASCFAQRFT-PRQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLAS 182

Query: 199 LLPLLISAVTAATVSYITTGTEAMFKFNLDQAFELERIPYVILL--GIFCGLISLYFTRA 256
           L P++ISAV A  VS +   ++A+  +N+  +  ++   Y +++  G+  GL        
Sbjct: 183 LGPVIISAVVALLVSNLINHSDALL-YNVQLSVTVQARDYALIISTGVLAGLCGPLLLTL 241

Query: 257 MNSIEGVFGKLK-NPYQKLAFGGVMLSVLIFLFPPLYGEGYDTIELLLNGTSAAEWDTVM 315
           MN+    F  LK  P  +LA GG+++ +L    P ++G GY T++  L            
Sbjct: 242 MNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPP-------- 293

Query: 316 NNSMFYGYGNLLQVYLMLIILLKVFASSATNGGGGCGGIFAPSLYLGCIAGFVFSHFSND 375
                      L + +  I L K+ A  A++G G  GG+F P+L++G   G ++      
Sbjct: 294 -----------LLMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGR---- 338

Query: 376 FAFSAYLPEKN-----FALMGMAGVMSGVMHAPLTGVFLIAELTGGYDLFLPLMIVSVSS 430
            +   + P+         L GMA +++   HAP+    +I E+TG Y L   L+I  V +
Sbjct: 339 -SLGLWFPDGEEITLLLGLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIA 397

Query: 431 YLTIIAFEPHSIYSMRLAK 449
            +        SIY    A+
Sbjct: 398 SVISRTLHRDSIYRQHTAQ 416