Pairwise Alignments

Query, 598 a.a., putative chloride channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 618 a.a., CLC voltage-gated chloride channel from Caulobacter crescentus NA1000 Δfur

 Score =  139 bits (351), Expect = 3e-37
 Identities = 135/575 (23%), Positives = 239/575 (41%), Gaps = 34/575 (5%)

Query: 26  FILILSFLVGIFTAIAALFLKFLIHQIQ----NFLTNNFNATSAN---YLYLVYPVIGIF 78
           +++ ++ +VG+     A+ L  L H  Q    NF  N   +       +  L  P+ G+ 
Sbjct: 58  WVIAVATVVGLVAGALAVALGALAHGTQVAIFNFDPNERLSAQVMIEPWRLLAIPLGGLV 117

Query: 79  LAGWFVRNIVKDDISHGVTKILYAISRRQGRIKRHNIWSSTIASAITIGFGGSVGAEAPI 138
           L G F   +++   +H V  +  A +   GR+   +     + + I+ G G SVG EA  
Sbjct: 118 L-GLFTAAVLRFRPNHAVDPV-EANALHGGRLSIRDSLIICVQTLISNGSGASVGLEAAY 175

Query: 139 VLTGSAIGSNLGSVFKMEHRTLMLLVGCGAAGAIAGIFKAPIAGLVFTLEVLMIDLTMSS 198
              G A  S +G    +    L +LVG GA  AIA  F AP+ G  +  E+++   T+++
Sbjct: 176 AQAGGATASWVGQRLNLRRGDLRILVGAGAGAAIAAAFGAPLTGAFYAFEIVIGAYTVAN 235

Query: 199 LLPLLISAVTAATVSYITTGTEAMFKFNLDQAFELERIPYVILLGIFCGLISLYFTRAMN 258
           + P+  +A+    V+     T  + K ++             LLG+      +   RA+ 
Sbjct: 236 IAPVAAAALAGVLVAKALGSTPYLLKTSVVAISSPADYALYGLLGLLAAFFGVALMRAVA 295

Query: 259 SIEGVFGKLKNP-YQKLAFGGVMLSVLIFLFPPLYGEGYDTIELLLNGTSAAEWDTVMNN 317
             +G   K   P + K A GGV L+ L    P     G+  + L LN             
Sbjct: 296 VADGWAIKAPLPRWSKPAIGGVALAALALATPQTLSGGHGALHLDLN------------- 342

Query: 318 SMFYGYGNLLQVYLMLIILLKVFASSATNGGGGCGGIFAPSLYLGCIAGFVFSHFSNDFA 377
                  +L    L+++IL+K  AS  +   G  GG+F  +L+LG + G  F+   N   
Sbjct: 343 ------SDLPLKVLLVLILMKAVASIVSLSSGFRGGLFFAALFLGVLMGQAFALVVNMTT 396

Query: 378 FSAYLPEKNFALMGMAGVMSGVMHAPLTGVFLIAELTGGYDLFLPLMIVSVSSYLTIIAF 437
            + +L     +L+GM  +   ++  P T  FL+ E+TG + +    +  S+ +   +   
Sbjct: 397 GTVHLDPIAASLVGMGALGVAIVGGPFTMSFLVLEVTGDFTVTGATLAASLIASAVVRET 456

Query: 438 EPHSIYSMRLAKRGQLLTHHKDKAVLTLMKMENVVEKDFVAVHPEMDLGELVKAIAASHR 497
             +S  + RL  RG+ +    D + +  +    ++ +D   +     L E  +       
Sbjct: 457 FGYSFSTWRLHLRGETIRSAHDVSWMRNLTAGKMMRRDVKTIAAGTSLAEFRRRFPLGST 516

Query: 498 NMFPVTDKKTGELLGIVLLDDIRNIMFRQELYHRFTVNKLMTSAPAKIFDTDGMEQVMQT 557
               +TD +TG   GIV    +    + +      TV  L       +     ++ +M  
Sbjct: 517 KRAVLTD-ETGRYAGIVATAAV----YAEPPERDATVAALAAHTRVALAPELSIKAIMTA 571

Query: 558 FDDTKAWNLPVVDEEGRYQGFVSKSKIFNSYRQVL 592
           FD+T A  L VVDE G   G ++++ +   Y + L
Sbjct: 572 FDETGADELAVVDEGGEVIGLITEAHVTRRYAEEL 606