Pairwise Alignments

Query, 598 a.a., putative chloride channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 593 a.a., chloride channel protein from Agrobacterium fabrum C58

 Score =  137 bits (346), Expect = 1e-36
 Identities = 133/575 (23%), Positives = 248/575 (43%), Gaps = 35/575 (6%)

Query: 27  ILILSFLVGIFTAIAALFLKFL---IHQIQNFLTNNFNATSANYLYLVYPVIGIFLAGWF 83
           ++ L+ L+G+   +    +  L   +H +   +    ++  +  + L  P+IG  L G  
Sbjct: 34  LVALAVLIGVAAGLLVALIGALSTALHILVFGVERLSSSDLSGRIVLFGPIIGGMLLGLI 93

Query: 84  VRNIVKDDISHGVTKILYAISRRQGRIKRHNIWSSTIASAITIGFGGSVGAEAPIVLTGS 143
           +  + K      +  I  A +   GR+   +     + + ++ GFG SVG EA      S
Sbjct: 94  IFILSKTRKKPMIDPI-EANALHGGRLSLTDSIIVCVQNIVSNGFGASVGLEAGYTQIAS 152

Query: 144 AIGSNLGSVFKMEHRTLMLLVGCGAAGAIAGIFKAPIAGLVFTLEVLMIDLTMSSLLPLL 203
            + S +G   K+    + +LVGCGAAGAIA  F AP+ G  + +E+++   T+ +L PL+
Sbjct: 153 GVASKIGIKLKLRRGDMRILVGCGAAGAIAAAFNAPLTGAFYAIELIIGTYTVVTLAPLI 212

Query: 204 ISAVTAATVSYITTGTEAMFKFNLDQAFELERIPYV--ILLGIFCGLISLYFTRAMNSIE 261
           +SA+ A TV  +  G       ++  A  +    YV  I LG+ C  I +   +A++ IE
Sbjct: 213 VSALVATTVIGLIGGHG--LSIDIVDASRVTPADYVPAIFLGVVCAAIGIVLMQAVSFIE 270

Query: 262 GVFGKLKNP-YQKLAFGGVMLSVLIFLFPPLYGEGYDTIELLLNGTSAAEWDTVMNNSMF 320
               K   P + +   GGV +  L  + P +   G+  + L ++                
Sbjct: 271 ETARKSAIPGWLRPTLGGVAVGGLALISPQVLSSGHGALHLNIDA-----------ELTI 319

Query: 321 YGYGNLLQVYLMLIILLKVFASSATNGGGGCGGIFAPSLYLGCIAGFVFSHFSNDFAFSA 380
           YG   L         +LK  AS+ + G    GG+F  SL++G + G +F+  +    + +
Sbjct: 320 YGLAGL--------FMLKAAASAISIGSNFRGGLFFASLFMGSLLGKIFALCAPYIGYGS 371

Query: 381 YLPEKNFALMGMAGVMSGVMHAPLTGVFLIAELTGGYDLFLPLMIVSVSSYLTIIAFEPH 440
             P   +A++GM+   + ++  PLT  FL  ELTG + +   ++   +++ L +     +
Sbjct: 372 TAPIV-YAVIGMSAFAAAIIGGPLTMTFLALELTGDFQITALVLAAVITTSLVVRTTFGY 430

Query: 441 SIYSMRLAKRGQLLTHHKDKAVLTLMKMENVVEKDFVAVHPEMDLGELVKAIAASHRNMF 500
           S  + R   RG+ +    D   +  + +  ++  D    +  M L    +          
Sbjct: 431 SFATWRFHLRGESIRSAHDIGWIRDLTVGKMMRADIRKANVSMGLPAFKEKFPLGSTQRV 490

Query: 501 PVTDKKTGELLGIVLLDDI-RNIMFRQELYHRFTVNKLMTSAPAKIFDTDGMEQVMQTFD 559
            +T    G   G+VL+ +I  + M R     + ++   +      +  T    Q    FD
Sbjct: 491 IMT-HDDGRYAGMVLVPEIYADPMDRDP--SKISLETYLHYKNDILLPTMNARQAAAAFD 547

Query: 560 DTKAWNLPVVDE--EGRYQGFVSKSKIFNSYRQVL 592
             ++  L VV++  E R  G +++S     Y + L
Sbjct: 548 AAESEALVVVNDKIENRPVGLLTESHTLRRYSEEL 582