Pairwise Alignments

Query, 313 a.a., malate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 320 a.a., putative malate dehydrogenase from Agrobacterium fabrum C58

 Score =  259 bits (662), Expect = 6e-74
 Identities = 122/306 (39%), Positives = 206/306 (67%), Gaps = 9/306 (2%)

Query: 3   KVTVVGAGNVGATCANVLAFNEVADEVVMLDVKEGVSEGKAMDMMQTAQLLGFDTTVVGC 62
           K+ ++G+G +G T A++ +  E+ D +V+ D+ +G+ +GK +D+ Q+  + GF+  + G 
Sbjct: 5   KIALIGSGMIGGTLAHLASLKELGD-IVLFDIADGIPQGKGLDIAQSGPVEGFNAKLSGA 63

Query: 63  TNDYAQTANSDVVVITSGIPRKPGMTREELIGVNAGIVKSVAENILKYSPNAILVVISNP 122
           + DYA    +DV ++T+G+ RKPGM+R++L+G+N  +++ V   I KY+PNA ++ I+NP
Sbjct: 64  S-DYAAIEGADVCIVTAGVARKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICITNP 122

Query: 123 MDTMTYLSLKALGLPKNRIIGMGGALDSSRFKYFLSQALGCNANEVEGMVIGGHGDTTMI 182
           +D M +   K  GLPKN+++GM G LDS+RF+ FL++    +  +V   V+GGHGD TM+
Sbjct: 123 LDAMVWALQKFSGLPKNKVVGMAGVLDSARFRLFLAEEFNVSVQDVTAFVLGGHGD-TMV 181

Query: 183 PLTRFATYKGMPVTN-----FISEEKLNEVAAATMVGGATLTKLLGT-SAWYAPGAAGAF 236
           PL R++T  G+P+T+     +++ E+L ++   T  GGA +  LL T SA+YAP A+   
Sbjct: 182 PLARYSTVGGVPLTDLVKMGWLTAERLEQIIQRTRDGGAEIVGLLKTGSAYYAPAASAIE 241

Query: 237 VVESILHDQKKMIPCSVYLEGEYGESDICIGVPVILGKNGIEKIVELDLNADEKAKFAAS 296
           + ES L D+K+++P + +L G+YG  D+ +GVP I+G  GIE+++E++LN +E+A F  S
Sbjct: 242 MAESYLKDKKRVLPAAAHLSGQYGVDDMYVGVPTIIGAGGIERVIEIELNKEEEAAFQKS 301

Query: 297 AKAVHG 302
             AV G
Sbjct: 302 VGAVAG 307