Pairwise Alignments

Query, 393 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 395 a.a., ABC-type multidrug transport system, permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  136 bits (343), Expect = 9e-37
 Identities = 97/365 (26%), Positives = 171/365 (46%), Gaps = 2/365 (0%)

Query: 11  LWQVMQRECRRLVSRPLYLFCMVIAPLFCYLFFTTLMDSGLPQNLPAGVVDMDDSSTSRN 70
           L  V++RE +RL      L  +   PL   L    +  +G+ ++LP  V+D D SS SR+
Sbjct: 10  LGPVVRREWQRLRHDAWDLGMLTWIPLGVCLLIWWMFAAGIARDLPIVVIDRDQSSLSRS 69

Query: 71  IVRNLDAFSQTGVVAHYSNVTDARIAVQEGKIYGFFYIPKGLSAEAQSQRQPKISFYTNY 130
           ++R +D      V A   N  +A   ++E + YG   +P     +  + R   +S++ N 
Sbjct: 70  LLRMVDESPGVRVAAAVGNEAEATAWLRERRAYGLLVVPASFQHDIGAGRSATVSWFYNG 129

Query: 131 SYLIAGSLLFRDMKMMGELTAGSAARSVLYAKGATEDQAMGFLQPIVIDTHPLNNPWLNY 190
            + +    L RD++      +     +    +GA+  QA    +PI +    L N   NY
Sbjct: 130 QFSVHAGGLTRDVRTAVSTLSAGIEMTARGKRGASAAQAAEQFEPIRLRLGTLYNENANY 189

Query: 191 SVYLCNTLIPGVLMLLIFMVTVYSIGVEIKDRTAREWLRMSNNSIYIALAGKLLPHTVVF 250
             +L   LIP +L + + +  + ++G E++  +  +WL  +    + A+AGKL+     F
Sbjct: 190 ESFLVLALIPSMLQIFVALAAITAVGRELRAGSVPQWLASAGGRWHTAVAGKLVIPAAAF 249

Query: 251 FIMGIFYNVYLYGFLHFPCNSGIFPMIFATLCLVLASQC-CGIVMIGTLPTLRLGLSFAS 309
            +  + + V+ +GF+      G   MI A L L++A+    G++MI    TLR  LS A+
Sbjct: 250 AVQAVLFVVF-FGFVRGWAIEGSGLMIVAGLWLLIAAYLGLGLLMIAVTLTLRNALSAAA 308

Query: 310 LWGVISFSISGFSFPVMAMNPVLQALSNLFPLRHYFLIYVDQALNGYSMAYSWSNYMALL 369
                +F+ SG  +P+ AM  + +A +   PL HY  +     L G    Y   + + LL
Sbjct: 309 FVTAPAFAFSGQGYPLSAMPALARAWAEALPLTHYLQLQGKHWLAGAPWTYGVGDALVLL 368

Query: 370 IFMML 374
            F ++
Sbjct: 369 GFAVV 373