Pairwise Alignments

Query, 393 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 384 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score = 87.4 bits (215), Expect = 6e-22
 Identities = 82/363 (22%), Positives = 149/363 (41%), Gaps = 14/363 (3%)

Query: 18  ECRRLVSRPLYLFCMVIAPLFCYLFFTTLMDSGLPQNLPAGVVDMDDSSTSRNIVRNLDA 77
           ECR     P+  +   I PL  +   ++    G   +LP  VVD D S  S+++ R LDA
Sbjct: 20  ECRLAFRSPVVHWLSWIFPLILFGLISSNFSEGTLLDLPVSVVDSDHSPLSKSLTRRLDA 79

Query: 78  FSQTGVVAHYSNVTDARIAVQEGKIYGFFYIPKGLSAEAQSQRQPKISFYTNYSYLIAGS 137
            S   V A+   + ++   ++  + Y   Y+P    A A + +QP +  Y  Y+ L  G+
Sbjct: 80  GSHAHVEAYPGGLQESLHRLRSAQDYALLYVPPDFEANALAGKQPSVVMY--YNALFYGA 137

Query: 138 LLFRDMKMMGELTAGSAA-RSVLYAKGATEDQAMGFLQPIVIDTHPLNNPWLNYSVYLCN 196
            L+      G +T  +A+ RS++        + +  L  + +    L N   +Y  Y   
Sbjct: 138 GLYSTQDFSGLMTEINASYRSII---AGEMGKTLPPLADVTLSYGSLFNASGSYIYYQQF 194

Query: 197 TLIPGVLMLLIFMVTVYSIGVEIKDRTAREWLRMSNNSIYIALAGKLLPHTVVFFIMGIF 256
                +L L +    +Y +        AR    +      +AL GKL P+T+ F  + + 
Sbjct: 195 AATIHLLQLFVVTCMIYVL--------ARSKSLLKARPFSLALLGKLAPYTLCFTSLLMV 246

Query: 257 YNVYLYGFLHFPCNSGIFPMIFATLCLVLASQCCGIVMIGTLPTLRLGLSFASLWGVISF 316
               L G      +     M+      V+A+Q  G+++     +     S  ++   I+ 
Sbjct: 247 EIAALVGIFDARVSGNPLFMLMIGFFYVMAAQSIGLLLFTFTSSTITAYSLIAILVSIAL 306

Query: 317 SISGFSFPVMAMNPVLQALSNLFPLRHYFLIYVDQALNGYSMAYSWSNYMALLIFMMLPF 376
           + SG + P ++M    + +SN+ PL H      D  L     +  +S    L I+ ++  
Sbjct: 307 TFSGMAVPELSMPLPARIISNIEPLTHALYAMFDVFLRQVPASAIFSVCALLSIYPLVTA 366

Query: 377 FVV 379
            +V
Sbjct: 367 LLV 369