Pairwise Alignments

Query, 393 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 775 a.a., ABC transporter permease from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  105 bits (262), Expect = 5e-27
 Identities = 84/372 (22%), Positives = 164/372 (44%), Gaps = 12/372 (3%)

Query: 18  ECRRLVSRPLYLFCMVIAPLFCYLFFTTLMDSGLPQNLPAGVVDMDDSSTSRNIVRNLDA 77
           E R LV+R    F     PL   +    ++  G+ +  P  VVD D+S+ SR  +RN++A
Sbjct: 19  EARLLVTRRWDAFVAFGLPLILLMVIAAMLAPGVIRQAPVAVVDQDNSAFSRAAIRNMEA 78

Query: 78  FSQTGVVAHYSNVTDARIAVQEGKIYGFFYIPKGLSAEAQSQRQPKISFYTNYSYLIAGS 137
                V    + +T+A   ++ G+IY   + P   S +   +R  +++   N ++   G+
Sbjct: 79  SPGVRVTHAPATMTEAMALMRRGEIYSVAHFPADFS-DGAFRRPEQVTVSFNGAFQTVGA 137

Query: 138 LLFRDMKMMGELTA-GSAARSVLYAKGATEDQAMGFLQPIVIDTHPLNNPWLNYSVYLCN 196
           L        G+  A  SAA   L  +          LQ   +    + NP L++ ++L  
Sbjct: 138 L-----SAWGQSAAIASAAGQQLQERARQRGLPETALQLPAVQVSIVGNPQLSFELFLGG 192

Query: 197 TLIPGVLMLLIFMVTVYSIGVEIKDRTAREWLRMSNNSIYIALAGKLLPHTVVFFIMGIF 256
            L PGVL LL     V ++G  ++  + + +   ++     AL G+L+PH V+F + G+ 
Sbjct: 193 LLAPGVLHLLAACSAVLAVGRLMQGGSFKCFKAETDGFTTTALIGRLIPHFVIFSLWGLA 252

Query: 257 YNVYLYGFLHFPCNSGIFPMIFATLCLVLASQCCGIVMIGTLPTLRLGLSFASLWGVISF 316
           +  +L G   +     +  +I   L L+  S      ++  L  + +  S  +++   + 
Sbjct: 253 WIAWLSGVRGWGVAGSLPLLILGILALMAVSVVLSAFLVAALGEVDMAFSATAIYSGAAI 312

Query: 317 SISGFSFPVMAMNPVLQALSNLFPLRHYFLIYVDQALNGYSMAYSWSNYM-----ALLIF 371
           + S  + P+       +  S++ P  HY  +   Q +   + A +W + M     A++ F
Sbjct: 313 AFSNGTLPLDHGPRFARIWSDILPYTHYLRLQTGQLVTSATSASAWRDLMILSGVAVVGF 372

Query: 372 MMLPFFVVHRLK 383
           +++  F+  R +
Sbjct: 373 LLMALFIRGRAR 384