Pairwise Alignments

Query, 419 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 389 a.a., ABC-type multidrug transport system, permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  167 bits (422), Expect = 7e-46
 Identities = 110/365 (30%), Positives = 178/365 (48%), Gaps = 14/365 (3%)

Query: 31  DQGVLIFFILVPLGYPLLYSFIYDNEVVREVPAVVVDDSHSSLSREYLRKVDATPDIQIV 90
           D G ++   +  + Y   Y   Y  E V++VP  VVD   S++SR+  R V A P +   
Sbjct: 26  DVGAIMLLFVGGIVYSFFYPLPYSRESVQQVPVAVVDQDLSAISRQITRYVAAHPAVDTQ 85

Query: 91  AYCADMEEAKQML-KNRLAYGIIYIPSDFSDNIAKGKQTQVSIYCDMSGLLYYKSML--I 147
               D+ EA+ +L KN +A G++ IP      +  G++ +V I  +   ++  K  L  +
Sbjct: 86  RVTPDLREAQDLLWKNEIA-GVLMIPQGLESKVLSGRRAEVDISGNGVYMMMNKVALNGL 144

Query: 148 ANTAVSLDMNKDIKIARSGNTTERQDEITGYPIEYEEISIFNPTAGFAAFLIPAVLVLII 207
           A    ++    ++K   +G  +  Q      P+    +++FN   G+ A+++P V VLII
Sbjct: 145 AEAVGTVSAGIELKRLAAGTPSPAQAMAQRQPVNVNAVALFNVREGYGAYIVPGVAVLII 204

Query: 208 QQTLLLGIGLAAGTARENNRFKDLVPINRHYNGTLRIVLGKGLSYFLVYVLVSFYVLHIV 267
           QQTLLL I L  GT RE   F    P+ R    +     G  L++  V    S Y    V
Sbjct: 205 QQTLLLAITLLFGTWRERGAF----PVRR----SSAAYFGMLLAFATVAFANSLYFFGFV 256

Query: 268 PRLFSLNQIGQPGSLVLFVAPYLAACIFFAMTTSIAIRNRETCMLIFVFTSVPLLFISGI 327
                  + G  G L+LF A +        M      R RE  + + + T++P +F+SG+
Sbjct: 257 LWWQDYPRAGNFGGLLLFAALFALCVAALGMLLGSLFRTRERSVQLLLCTALPFMFLSGL 316

Query: 328 SWPGAAIPPFWKYVSYIFPSTFGINGFVKINNMGATLSEVAFEYKALWIQAGVYFLTTCW 387
           SWP  A+PP  + + ++ PST G+ GF+ +N +GA+L++VA E  AL   A   F     
Sbjct: 317 SWPVEALPPALQALRWLVPSTAGVQGFIALNQLGASLAQVATEAAAL--GAVFVFSAVVG 374

Query: 388 VYRWQ 392
           ++RW+
Sbjct: 375 LWRWR 379