Pairwise Alignments

Query, 417 a.a., putative exodeoxyribonuclease VII large subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 459 a.a., exodeoxyribonuclease VII large subunit from Paraburkholderia sabiae LMG 24235

 Score =  128 bits (321), Expect = 4e-34
 Identities = 116/440 (26%), Positives = 182/440 (41%), Gaps = 65/440 (14%)

Query: 9   LNALVRRSLEQCLPDEYWIQAELSDVRSNTTGHCYLEFVQKDPRSNNLVAKARGMIWSNI 68
           LN  +   LE+  P   W+  E+S+     +GH Y  F  KD ++       RG      
Sbjct: 24  LNRAIGTMLERSFP-LVWVSGEVSNFTRAASGHWY--FSIKDAQAQMRCVMFRG------ 74

Query: 69  YRLLKPYFEETTGQLFASGIKVLVKVTVQFHELYGYSLTVLDIDPAYTLGDMARRRREIL 128
               +  + E T +    G K+ V+  V  +E  G     ++       G +      + 
Sbjct: 75  ----RAQYAEFTPR---EGDKIEVRALVTMYEPRGELQLNVEAVRRTGQGRLYEAFLRLK 127

Query: 129 MQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYTELFPALM 188
            QLE EG+    ++  +P  P+ I +++S  AA   D    L   +        ++PA +
Sbjct: 128 AQLEGEGLFDPQRKRALPAHPRSIGIVTSLQAAALRDVLTTLARRAP--HIPVIVYPAPV 185

Query: 189 QGNQVEESVLAALDRINDRVNEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPVITG 248
           QG  V   + A ++  N R  E DV+++ RGGG+  DL  F+  +LA A A   +PV++G
Sbjct: 186 QGAGVSAKLAAMVEAANRR-REVDVLIVCRGGGSIEDLWAFNEEVLARAIAASEVPVVSG 244

Query: 249 IGHERDDTVLDSVAHTRVKTPTAAAELL-------------------------------- 276
           +GHE D T+ D  A  R  TPT AAEL+                                
Sbjct: 245 VGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRDLDHRHATLARGFGRMMERRAQQ 304

Query: 277 -----------IHRITESADHLEELSARLQQGAYALLEQEGRRLEMIQTRIPNLVHRKLT 325
                        R+     HL++LS RL       +     R  ++Q R        LT
Sbjct: 305 LDWLARRLVSPAERLARQRTHLQQLSVRLASAGARPVRDARARFSLVQMRWQRW-RPDLT 363

Query: 326 DARFALLAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKLLSRGYSITL--KDGKAV 383
             R  +    + L +A      RH  R+E L  R+   SP + L RGY+  L  ++G+AV
Sbjct: 364 SHRSKVTGLSERLDRALLRQHERHVARVETLAARLEVLSPQRTLERGYAALLDAQNGRAV 423

Query: 384 TDAASLNPGDQLVTRLAKGS 403
              ++L PG ++   LA+GS
Sbjct: 424 RAPSALKPGRRMTVHLAEGS 443