Pairwise Alignments

Query, 417 a.a., putative exodeoxyribonuclease VII large subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 464 a.a., exodeoxyribonuclease VII large subunit from Pectobacterium carotovorum WPP14

 Score =  129 bits (324), Expect = 2e-34
 Identities = 118/448 (26%), Positives = 198/448 (44%), Gaps = 68/448 (15%)

Query: 9   LNALVRRSLEQCLPDEYWIQAELSDVRSNTTGHCYLEFVQKDPRSNNLVAKARGMIWSNI 68
           LN  VR+ LE  +  + W+  E+S++   ++GH Y  F  KD R     A+ R  ++   
Sbjct: 15  LNQTVRQLLEMEM-GQIWLSGEISNLSQPSSGHWY--FTLKDER-----AQVRCAMFRTS 66

Query: 69  YRLLKPYFEETTGQLFASGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMARRRREI 127
            R  K  F    GQ      +VL++ ++  +E  G Y L    + PA   G + ++  ++
Sbjct: 67  NR--KVTFRPQNGQ------QVLIRASITLYEPRGDYQLLAESMQPAGD-GLLQQQFEQL 117

Query: 128 LMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYTELFPAL 187
             +L  EG+     +  +P   +++ VI+SA+ A   D    LQ           ++P  
Sbjct: 118 KQRLAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVI--VYPTS 175

Query: 188 MQGNQVEESVLAALDRINDRVNEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPVIT 247
           +QG +    ++ A++  N R +E DV+++ RGGG+  DL  F+   +A A     +P+++
Sbjct: 176 VQGAEAPLQIVRAIELANQR-DECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVS 234

Query: 248 GIGHERDDTVLDSVAHTRVKTPTAAAEL-------LIHRITESADHLE------------ 288
            +GHE D T+ D V   R  TP+AAAEL       L+ +I      LE            
Sbjct: 235 AVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRNR 294

Query: 289 --------------------------ELSARLQQGAYALLEQEGRRLEMIQTRI-PNLVH 321
                                     +L  RL       L Q  RR E +Q R+      
Sbjct: 295 DFTRLHHRLQQQHPQLRLARQQAQLVKLRQRLDDAMQQQLRQTSRRSERLQQRLMQQQPQ 354

Query: 322 RKLTDARFALLAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKLLSRGYSI-TLKDG 380
            ++  A+  L      +  A +  L++++ +L +   R+   SP   L+RGY++ T  DG
Sbjct: 355 TRIHRAQQRLQQLSYQMQSAVERQLNQNKQKLGIACSRLEGVSPLATLARGYNVTTAPDG 414

Query: 381 KAVTDAASLNPGDQLVTRLAKGSFTSEV 408
           K + + A + PG+ L TRL  G   S+V
Sbjct: 415 KVLKNVAQITPGETLKTRLQDGWVESQV 442