Pairwise Alignments

Query, 417 a.a., putative exodeoxyribonuclease VII large subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 456 a.a., exodeoxyribonuclease VII large subunit from Escherichia coli ECRC99

 Score =  129 bits (324), Expect = 2e-34
 Identities = 123/449 (27%), Positives = 192/449 (42%), Gaps = 68/449 (15%)

Query: 9   LNALVRRSLEQCLPDEYWIQAELSDVRSNTTGHCYLEFVQKDPRSNNLVAKARGMIWSNI 68
           LN  VR  LE  +  + WI  E+S+     +GH Y  F  KD       A+ R  ++ N 
Sbjct: 15  LNQTVRLLLEHEM-GQVWISGEISNFTQPASGHWY--FTLKDD-----TAQVRCAMFRNS 66

Query: 69  YRLLKPYFEETTGQLFASGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMARRRREI 127
            R +   F    GQ      +VLV+  +  +E  G Y + V  + PA   G + ++  ++
Sbjct: 67  NRRVT--FRPQHGQ------QVLVRANITLYEPRGDYQIIVESMQPAGE-GLLQQKYEQL 117

Query: 128 LMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYTELFPAL 187
             +L+ EG+  L  +  +P     + VI+S T A   D  H L+           ++P  
Sbjct: 118 KAKLQAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVI--IYPTA 175

Query: 188 MQGNQVEESVLAALDRINDRVNEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPVIT 247
           +QG+     ++ A++  N + NE DV+++ RGGG+  DL  F+   +A A     +PV++
Sbjct: 176 VQGDDAPGQIVRAIELAN-QCNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVS 234

Query: 248 GIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQGAYALLEQEGR 307
            +GHE D T+ D VA  R  TP+AAAE++     E    ++    RL+      L    R
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTR 294

Query: 308 RLEMI----------------QTRIPNLVHRKLTDARFALLAAGKDLAQATQTL------ 345
           R   I                QT +  L  R        L  AG+   + TQ L      
Sbjct: 295 RFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQ 354

Query: 346 --LSRHRHRLELLRQRVAD----------------------ASPDKLLSRGYSI-TLKDG 380
             + R + R++ L  R+A+                       SP   L+RGYS+ T  DG
Sbjct: 355 PKIHRAQTRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDG 414

Query: 381 KAVTDAASLNPGDQLVTRLAKGSFTSEVR 409
           K +     +  G+ L TRL  G   SEV+
Sbjct: 415 KVLKKVKQVKAGEMLTTRLEDGWVESEVK 443