Pairwise Alignments

Query, 417 a.a., putative exodeoxyribonuclease VII large subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 532 a.a., exodeoxyribonuclease VII large subunit from Agrobacterium fabrum C58

 Score =  110 bits (274), Expect = 1e-28
 Identities = 91/325 (28%), Positives = 157/325 (48%), Gaps = 33/325 (10%)

Query: 5   SLLELNALVRRSLEQCLPDEYWIQAELSDVRS-NTTGHCYLEFVQKDPRSNNLVAKARGM 63
           S+ EL+  ++R++E    ++  ++ E+S  R  +++GH Y  F  KD R     A+   +
Sbjct: 17  SVSELSGSIKRTVETAF-EQVRVRGEISGYRGPHSSGHAY--FSLKDDR-----ARIDAV 68

Query: 64  IWSNIYRLLKPYFEETTGQLFASGIKVLVKVTVQFHELYGYSLTVLDIDPAYTLGDMA-- 121
           IW   +  LK +  E   ++ A+G     K+T  F     Y + +  ++PA     MA  
Sbjct: 69  IWKGTFSRLK-FRPEEGMEVIATG-----KITT-FPGSSKYQIVIESLEPAGAGALMALL 121

Query: 122 --RRRREILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFF 179
             RRRR     L  EG+    ++  +P +P+ I V++S T A   D  H++   S  F  
Sbjct: 122 EDRRRR-----LAAEGLFDSARKRPLPFMPRVIGVVTSPTGAVIRDILHRI---SDRFPV 173

Query: 180 YTELFPALMQGNQVEESVLAALDRIN-----DRVNEFDVVVIIRGGGATSDLSGFDTYLL 234
           +  ++P  +QG    E V  A+   N       +   DV+++ RGGG+  DL  F+  ++
Sbjct: 174 HVVVWPVKVQGEGSGEEVANAIRGFNALKPGGDIARPDVLIVARGGGSLEDLWSFNDEIV 233

Query: 235 AAACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARL 294
             A A+  +P+I+ +GHE D T++D  A  R  TPT AAE+ +    E    L  L+ARL
Sbjct: 234 VRAAAESEIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARL 293

Query: 295 QQGAYALLEQEGRRLEMIQTRIPNL 319
                  ++   + +  +   +P+L
Sbjct: 294 SGSVSRQMDNRRQGVRALVRALPSL 318