Pairwise Alignments

Query, 414 a.a., ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 424 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Escherichia fergusonii Becca

 Score =  409 bits (1052), Expect = e-119
 Identities = 212/391 (54%), Positives = 273/391 (69%), Gaps = 9/391 (2%)

Query: 10  CSFCGRSENEVGFLITGMNGYICDSCATQAYEITQEALGEGRKRAGATKLNLKELPKPVE 69
           CSFCG+S++EV  LI G + YICD C     +I +E + E      A       LP P E
Sbjct: 15  CSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEV-----APHRERSALPTPHE 69

Query: 70  IKKFLDQYVIGQDDAKRFLSVSVYNHYKRLLQKDSGDDVEIEKSNIIMVGSTGTGKTLLA 129
           I+  LD YVIGQ+ AK+ L+V+VYNHYKRL   D+ + VE+ KSNI+++G TG+GKTLLA
Sbjct: 70  IRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLA 129

Query: 130 RTIAKLLHVPFTIVDATVLTEAGYVGEDIESILTRLLQVADYNVPEAEQGIVFIDEIDKI 189
            T+A+LL VPFT+ DAT LTEAGYVGED+E+I+ +LLQ  DY+V +A++GIV+IDEIDKI
Sbjct: 130 ETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189

Query: 190 ARKGDNPSITRDVSGEGVQQGLLKLLEGSVVNVPPQGGRKHPDQKMIPVNTKNILFICGG 249
           +RK DNPSITRDVSGEGVQQ LLKL+EG+V  VPPQGGRKHP Q+ + V+T  ILFICGG
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGG 249

Query: 250 AFDGIEKKIAQRLNTHV---VGYTASQKTAVIDKNNMMQYIAPQDLKSFGLIPEIIGRLP 306
           AF G++K I+ R+ T      G T   K+    +  ++  + P+DL  FGLIPE IGRLP
Sbjct: 250 AFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLP 309

Query: 307 VLTYLNPLDRNALRAILTEPKNSIIKQYIKLFEMDGIKLTFEDSVFEYIVDKAVEYKLGA 366
           V+  LN L   AL  IL EPKN++ KQY  LF ++G+ L F D   + I  KA+  K GA
Sbjct: 310 VVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGA 369

Query: 367 RGLRSIVETIMMDVMFEIPSESKKEYKVTLD 397
           RGLRSIVE  ++D M+++PS    E KV +D
Sbjct: 370 RGLRSIVEAALLDTMYDLPSMEDVE-KVVID 399