Pairwise Alignments

Query, 414 a.a., ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 407 a.a., endopeptidase Clp ATP-binding regulatory subunit (clpX) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  533 bits (1372), Expect = e-156
 Identities = 263/406 (64%), Positives = 331/406 (81%), Gaps = 5/406 (1%)

Query: 10  CSFCGRSENEVGFLITGMNGYICDSCATQAYEITQEALGEGRKRAGATKLNLKELPKPVE 69
           CSFCGR++ +V  +++G++ +IC+ C  QAY+I    LGE  K     K    +L KP E
Sbjct: 6   CSFCGRNKKDVDLMVSGISAHICNFCIDQAYQI----LGEEEKTKKQEKKPKFKLRKPKE 61

Query: 70  IKKFLDQYVIGQDDAKRFLSVSVYNHYKRLLQKDSGDDVEIEKSNIIMVGSTGTGKTLLA 129
           + ++L+ YVIGQD+AK+ LSV+VYNHYKRLLQKD+ DDV+IEKSNIIMVG TGTGKT LA
Sbjct: 62  LTEYLNNYVIGQDEAKKVLSVAVYNHYKRLLQKDNKDDVKIEKSNIIMVGDTGTGKTYLA 121

Query: 130 RTIAKLLHVPFTIVDATVLTEAGYVGEDIESILTRLLQVADYNVPEAEQGIVFIDEIDKI 189
           +T+AK+L VPF I DATVLTEAGYVGED+ESILTRLLQ ADYN+  AE+GIV+IDEIDKI
Sbjct: 122 KTLAKILEVPFCIADATVLTEAGYVGEDVESILTRLLQSADYNLEAAERGIVYIDEIDKI 181

Query: 190 ARKGDNPSITRDVSGEGVQQGLLKLLEGSVVNVPPQGGRKHPDQKMIPVNTKNILFICGG 249
           ARK DNPSITRDVSGEGVQQ +LKLLEG+ VNVPPQGGRKHPDQKMI VNT++ILFICGG
Sbjct: 182 ARKSDNPSITRDVSGEGVQQAMLKLLEGTTVNVPPQGGRKHPDQKMIAVNTEDILFICGG 241

Query: 250 AFDGIEKKIAQRLNTHVVGYTASQKTAVIDKNNMMQYIAPQDLKSFGLIPEIIGRLPVLT 309
           AFDGI + IA RLNT  +G++   ++ V+D+NN++QY+   DLKSFGLIPE+IGRLPVLT
Sbjct: 242 AFDGISRHIANRLNTQPLGFSKKTESDVVDRNNLLQYVTAPDLKSFGLIPELIGRLPVLT 301

Query: 310 YLNPLDRNALRAILTEPKNSIIKQYIKLFEMDGIKLTFEDSVFEYIVDKAVEYKLGARGL 369
           +L+PLD+  L++ILTEPKN++ KQYIKL +M+G+KL FE+S  +YIV+KAVEY LGARGL
Sbjct: 302 HLDPLDKETLKSILTEPKNALTKQYIKLMDMEGVKLEFEESGIDYIVEKAVEYNLGARGL 361

Query: 370 RSIVETIMMDVMFEIPSESK-KEYKVTLDYAKQQLEKANMARLQIA 414
           RSI E I+ D M+E+PS+ + KE  V   YA++Q +K+   +LQ+A
Sbjct: 362 RSICEAIITDAMYELPSDQETKELVVNRKYAQRQFDKSKFKKLQVA 407