Pairwise Alignments

Query, 551 a.a., acetyl-coenzyme A synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 645 a.a., acetate--CoA ligase from Magnetospirillum magneticum AMB-1

 Score =  204 bits (518), Expect = 1e-56
 Identities = 165/554 (29%), Positives = 267/554 (48%), Gaps = 42/554 (7%)

Query: 30  NFGYDVVDAWAAEQPDKNALLWTNDQ-GESRQFSFADMKRYTDMTASYFQSLGIGRGDMV 88
           N   + +D   A++ D+ A++W  D   ES   ++ D+       A+    LG+ +GD V
Sbjct: 73  NVSANCLDRHLAKRRDQTAIIWEGDDPNESAHITYGDLHERVCRLANAMTDLGVKKGDRV 132

Query: 89  MLILKRRYEFWYSTIALHKLGATVIPATHLLTKKDIIYRCNAADIKMIVAAGEGI----- 143
            + L    E   + +A  ++GA         +   +  R    D  +++ A EG+     
Sbjct: 133 TIYLPMIPEAAVAMLACARVGAVHSIVFGGFSPDALAGRIQDCDSSLLITADEGLRGGRK 192

Query: 144 --ILQHIKDALPECPSVEKLVSV---GPEVP--EGFED-FHQGIDNAAPFIRPRHANTND 195
             +  ++  AL  C S + ++ V   G ++    G +  +H  +  AAP   P   +  D
Sbjct: 193 VPLKANVDKALETCWSCKSVIVVKRTGGDIHMVTGRDHWYHDLVAKAAPTHTPVEMSAED 252

Query: 196 DISLMYFTSGTTGEPKMVAHDFTYPLGHIVTGSFWH----NLDENSLHLTIADTGWGKAV 251
            + L+Y TSG+TG+PK V H      G++V  S  H    +  E  ++   AD GW    
Sbjct: 253 PLFLLY-TSGSTGKPKGVVHTTG---GYLVYASMTHQYVFDYHEGDIYWCTADVGWVTGH 308

Query: 252 WGKLYGQWIAGANIFVYDHEKFTPAA--ILEKIQEYQVTSLCAPPTIFRFLIHED---LT 306
              +YG    GA   +++     P      + + +++V      PT  R L+ E    + 
Sbjct: 309 SYIVYGPLANGAITLMFEGIPNYPTVSRFWDVVDKHKVNIFYTAPTAIRSLMREGEEPVK 368

Query: 307 KYDLSSLRYCTIAGEALNPAVFETFKKLTG---IKLMEGFGQTETT-LTVATMPWMEP-K 361
           K   +SLR     GE +NP  +  + ++ G     +++ + QTET  + +  +P     K
Sbjct: 369 KTSRASLRLLGSVGEPINPEAWTWYHRVVGDGRCPIVDTWWQTETGGILITPLPGATALK 428

Query: 362 PGSMGLPNPQYDVDLIDSEGRSVEAGEQGQIVIRTSKGKPLGLFKEYYRDAERTHEAW-- 419
           PGS   P       ++D+EG+++E   +G + +    G P G  +  + D ER  +++  
Sbjct: 429 PGSATRPFFGVKPVMVDAEGKTLEGAVEGNLCL-AEPGWP-GQMRTLWGDHERFKQSYFA 486

Query: 420 -HDGIYYTGDVAWKDEDGYLWFVGRADDVIKSSGYRIGPFEVESALMTHPAVIECAITGV 478
            + G+Y+TGD A +DEDGY W  GR DDVI  SG+R+G  EVESAL+ HP V E A+ G 
Sbjct: 487 TYQGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRMGTAEVESALVAHPKVAEAAVVGY 546

Query: 479 PDEIRGQVVKATIVLSKDYKARAGEELIKELQNHVKKVTAPYKYPRVIEFVDELPKTISG 538
           P +I+GQ + A + L         E+L KEL N V+K   P   P +I++   LPKT SG
Sbjct: 547 PHDIKGQGIYAYVTLVAG--EEPSEDLRKELVNWVRKEIGPIASPDLIQWSPGLPKTRSG 604

Query: 539 KI-RRV--EIREND 549
           KI RR+  +I END
Sbjct: 605 KIMRRILRKIAEND 618



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 169 PEGFEDFH-QGIDNAAPFIRPRHANTNDDISLMYFTSGTTGEPKMVAHDFTYPLGHIVTG 227
           P+GF   H + ID   PF + ++ + + D+S+ +F  GT         D         T 
Sbjct: 33  PDGFWGEHGKRIDWIKPFTKVKNVSYSGDVSIKWFEDGTLNVSANCL-DRHLAKRRDQTA 91

Query: 228 SFWHNLDEN-SLHLTIAD 244
             W   D N S H+T  D
Sbjct: 92  IIWEGDDPNESAHITYGD 109