Pairwise Alignments

Query, 1330 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1376 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  448 bits (1153), Expect = e-129
 Identities = 359/1404 (25%), Positives = 658/1404 (46%), Gaps = 139/1404 (9%)

Query: 13   FIVLLISSAVSKGQIYKYIGLEDGLNNQKIYHIQKDRRGYMWFLTQEGVDRYDGKHIKHY 72
            F++L  +   +   + + +G+E GL+N  +  I +D++G++WF T+EG++++DG     Y
Sbjct: 9    FLLLSATFVAAHPYLIQRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFITY 68

Query: 73   TFSDDSMKLDSRIA--LNWLYMDQ-EDVLWVIGQKGRIFRYDSQHDKFELAYVHPE---- 125
               + S  + S     LN +Y D  + V+W+  Q+  +  Y+ +   F +   +PE    
Sbjct: 69   YKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQS 128

Query: 126  LIRNKFQAFLDYGYLDKNDHIWLC-YKDTITWYNIRTGTTQHMPKPVDGAIS-----TIE 179
            LI N            K   +W+C Y   I + +I TG   H  K    A+      T  
Sbjct: 129  LITNDVTHITSSVQAGKG--LWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTAT 186

Query: 180  QADGGHFFIG-TGSGLFCVGIEKGELKQIPDEVVKSIVTPVHEL--YYHTVSKQLFVGSY 236
            +A+ G  +IG    GL  + +    +K    +       P +++   Y   +  +++G+ 
Sbjct: 187  EAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTS 246

Query: 237  KEGILIYDIGKTQKITPCYA-PNNVE------VNQIVALNADELLIATGGKGVYKLNVNT 289
            K G+ +++   T+  T  +  P N+       +  I  L  ++L IAT   G+  L++  
Sbjct: 247  K-GLALFN-ANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQ 304

Query: 290  CK-------SEPYITADYSSYNGMNGNNINDIYVDEEERIWLANYPTGITIRNNRYGRYD 342
             +          +I    ++Y+  N +    I+ D    IW+  +  GI   +N    + 
Sbjct: 305  NQFLLPEQIRFEFIREGDNNYSLSNAS-ARYIFQDSFNNIWIGTWGGGINFISNAPPTFH 363

Query: 343  LIKHSLG--NNRSLVNDQVHDVIEDSDGDLWFATSNG----------ISFYQTDTREWCS 390
               +S    N  SL N  V  V +D  G LW  T  G          ++ Y  + RE  S
Sbjct: 364  TWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLS 423

Query: 391  FFSSFDPVPDDENHIFLALCEVSPGVIWAGGFTSGI-YKIEKKKGFKISYLSPAAIAGIR 449
                        N +  +L + S G +W G +   I Y   + K F+I  L    +  +R
Sbjct: 424  ------------NSVLCSLKD-SEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVR 470

Query: 450  PDQYIYDIKKDSSGDVWSGGYYHLKRINLETKNVRLYPGVSS-------ITTILEKNARQ 502
                     +D +  +W G +  +  I+L +K V  +   S+       + +I + +  +
Sbjct: 471  V------FYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR 524

Query: 503  MWIGT---RMGLYQLDKQSGVYRYIDLP-VESPYICALYQREDGILYIGTRGAGLLVYDI 558
             WIGT    +G+Y  D Q  V ++       S  I  +Y+   G +++ T G GL+ +  
Sbjct: 525  FWIGTFGGGVGIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFP- 581

Query: 559  NKKKFIHQYRTDNCALISDNIYTIIPRQDENLLMGTENGITIYSPKDHFFRNWTREQGLM 618
            + + F +Q       L + +I  I   ++ N+   T  GI+ Y      F  +     + 
Sbjct: 582  SARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDHSNNIP 641

Query: 619  SVNFNAGSATTYSNSTLVFGGNDGAVKFPTDIEIPEPYYSRLLLRDFMIAYHPVYPGDDG 678
              +F +G  T   N  + FG  +G   F  DI I  P    +++    I          G
Sbjct: 642  QGSFISGCVTKDHNGLIYFGSINGLCFFNPDIAINSPQIPPVVITKVRIP---------G 692

Query: 679  SPLKKDINETDC------LELAYGQNTFSLDVASINYDYPSNILYSWKIDGYHKEWTRPS 732
                ++ NET        +EL + QN+F+L     +Y   + + Y++ + G    W   +
Sbjct: 693  RLTSREKNETAIPISEGEIELTHEQNSFNLTFNVQDYSLANQVEYAYMLKGLENSWYTIN 752

Query: 733  QDNRIVVRNLPPGSYTLQIRTVSNEEKYKTYETRSIQIIITPPVWASMWAMVGYAILVVL 792
            + N +  RN+PPG Y   ++   + + +   +T S++I I PP+W + WA + Y ++ + 
Sbjct: 753  EQNSVTFRNIPPGKYEFLVKARLHNQDWSE-DTTSLRIHINPPLWLTWWAKLIYILITIS 811

Query: 793  IMIIIFRVIMLHKQK------------------KISDEKTRFFINTAHDIRTPLTLIKAP 834
            I   I+ +I  +K+K                  +++ E+ RF+ N  H++RTPLTLI  P
Sbjct: 812  I---IYTIIHAYKKKIDLESLYTLEKKNHEQEQELNQERLRFYTNITHELRTPLTLILGP 868

Query: 835  LEEVVENHMVAEKALPHMNMALKNVNTLLQLTTNLINFERIDVYSSTLYVSEYELNSYMN 894
            LE++ ++  +  +    +++   +   LL L   ++ F + +  +  L V +  +   ++
Sbjct: 869  LEDMQKDTSLPTRQAQKLSVIHLSALRLLNLINQILEFRKTETQNKKLCVCKGNIVPLIH 928

Query: 895  DVCATFRKYAEMKRVRFVYESNFDYLNVWFDSDKMGSILKNILSNALKYTPENGSVCIC- 953
            ++   +++  + K + F  +   + + ++FD + +  IL N++SNA+KYT E G + +  
Sbjct: 929  EIGLKYKELNQKKAIDFQIQIEKEEMPLFFDKEIITIILDNLISNAIKYT-EQGKITLSL 987

Query: 954  --ACEEGNTWS-IEVKDTGIGIPSSEQKKLFRNCFRGSNVVNLKVTGSGIGLMLVYKLVK 1010
                  G T++ I+V DTG GI +     +F   ++ S     + +G+GIGL LV  LV+
Sbjct: 988  YPTTRNGVTYTEIKVSDTGYGISAEALPHVFDRYYQESG--KHQASGTGIGLALVRNLVE 1045

Query: 1011 LHKGKIHIQSVEHQGTCVQITFPKGNTHLHKAKFISPKTPNERMDAVVLGGTSDLPVLEA 1070
            LH+G+I ++S++++G+   I+    N + +     S K   E M +  +   S     + 
Sbjct: 1046 LHEGEIRVESIQNEGSTFYISLLTDNIYPNALHGDSTKQTEEEMISEAVPEDS-----QN 1100

Query: 1071 PQIKTSLQRILVVEDNDDLRNYLVDMLMAGYNIQSCSNGKDALVIIKEFNPDLVISDIMM 1130
             + +TS   +L+VEDN+D++ Y+ +     + + + SNG++         PD+++SDIMM
Sbjct: 1101 TEPETSKPILLIVEDNEDIQKYIAESFSDSFEVITGSNGEEGKQQALNRIPDIIVSDIMM 1160

Query: 1131 PEMSGDELCSAIKTSVEMSHIPVILLTALGDEKNILGGLEIGADAYITKPFSVGILKVTI 1190
            P M G  LC  +K  V  SHIPVILLTA    ++   G E+GAD+Y+TKPFS  +L+  I
Sbjct: 1161 PVMDGITLCRQLKEDVRTSHIPVILLTAKDSLQDKEEGYEVGADSYLTKPFSASLLRSRI 1220

Query: 1191 KNILANRELLRQVY---------NSIENKEKHLPVNCTNTLDWKFIASVKECIEKNMGDL 1241
             N+L +R+ L   +         NS  ++++ +     + LD +FI  + + +E N+   
Sbjct: 1221 NNLLDSRKKLIAQFQQTGTNHNPNSHLDEKRSIITEALSKLDNEFIEKITQLVEDNLSSE 1280

Query: 1242 DFGVDVLSNQHHMSRTSFYNKLKALTGYAPADYIRMIRLQRAAQLLKQKEYTITEIAEIV 1301
               +  LS++  MS ++ Y K+KALTG +  +YIR +++Q A +LL + +Y I+EIA  +
Sbjct: 1281 KIDITYLSDKMCMSGSTLYRKMKALTGLSTNEYIRKVKMQNAERLLLEGKYNISEIAYKI 1340

Query: 1302 GFSDAKYFREVFKKYYNVSPSKFV 1325
            G +   YFR+ FK  + VSPS ++
Sbjct: 1341 GMNSTGYFRQCFKDEFGVSPSDYL 1364