Pairwise Alignments

Query, 231 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 229 a.a., Inner membrane protein YohK from Escherichia fergusonii Becca

 Score =  127 bits (320), Expect = 1e-34
 Identities = 69/228 (30%), Positives = 122/228 (53%)

Query: 1   MSFLENNFFLLAVTFGVFFFAKLLQKKTGLVLLNPILLTIAVLIIFLKMANISYETYNQG 60
           M+  + +   LA+T  ++F  K L ++   + L P++LT  +L++ L   NIS++ Y   
Sbjct: 1   MANFQLSMLCLAITLVIYFLNKRLYRRFRKLPLMPLVLTPTLLVMLLVFGNISWQNYIGE 60

Query: 61  GHLIEFWLRPAVVALGVPLYLQLEMIKKQLLPILLSQLAGCIVGVISVVLIAKFMGASQE 120
            H + + L PA +A  VP+Y    +IK+  + +    L   +V V S V +A+      E
Sbjct: 61  AHWLLWLLGPATIAFAVPVYDNRAIIKRHWMSLTAGVLTATVVAVTSSVWLARLFTLPDE 120

Query: 121 VILSLAPKSVTTPIAMEVTKAIGGIPSLTAAVVVAVGLLGAICGFKTMKIMHVGSPIAQG 180
           +  SLA +SVTTP A+  ++++GG P L A  VV  G+ G   G      + +   +A+G
Sbjct: 121 IQRSLAVRSVTTPFALAASQSLGGQPDLVALFVVVTGVFGMAIGDVLFLRLSIREGMAKG 180

Query: 181 LSMGTAAHAVGTSTAMDISSKYGAYASLGLTLNGIFTALLTPTILRLL 228
              G A+H  GT+ + ++  + G  ASL + L+G+   L++P + R++
Sbjct: 181 AGFGAASHGAGTARSYELGQQEGVVASLVMMLSGVLMVLVSPLVARMM 228