Pairwise Alignments

Query, 231 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 231 a.a., Inner membrane protein YohK from Escherichia fergusonii Becca

 Score =  175 bits (444), Expect = 6e-49
 Identities = 92/225 (40%), Positives = 144/225 (64%)

Query: 4   LENNFFLLAVTFGVFFFAKLLQKKTGLVLLNPILLTIAVLIIFLKMANISYETYNQGGHL 63
           + N ++ L +T  VFF A+ L  +    LLNP+L+ + V+I FL +  ISY++Y +G  +
Sbjct: 2   MANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSEV 61

Query: 64  IEFWLRPAVVALGVPLYLQLEMIKKQLLPILLSQLAGCIVGVISVVLIAKFMGASQEVIL 123
           +   L+PAVVAL  PLY QL  I+ +   I+     G +V +++   +A  MGAS E+  
Sbjct: 62  LNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIAA 121

Query: 124 SLAPKSVTTPIAMEVTKAIGGIPSLTAAVVVAVGLLGAICGFKTMKIMHVGSPIAQGLSM 183
           S+ PKSVTTPIAM V  +IGGIP+++A  V+ VG+LGA+ G   +  M + +  A+GL+M
Sbjct: 122 SILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLAM 181

Query: 184 GTAAHAVGTSTAMDISSKYGAYASLGLTLNGIFTALLTPTILRLL 228
           GTA+HA+GT+   ++  + GA++SL L L GI T+L+ P +  ++
Sbjct: 182 GTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPII 226