Pairwise Alignments

Query, 309 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 314 a.a., DNA uptake-like protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  108 bits (271), Expect = 1e-28
 Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 28/315 (8%)

Query: 6   FYFTKTERQGIIVLVVLVIGVYTIPALLQAFSGPEKTDPTEQAKSEKEYNEFISSIKEAK 65
           F F++ E    +VL+ L++ +   P L       E    T  A+  +  +  ++ + EAK
Sbjct: 12  FGFSQREVNAFLVLLTLLVLLTAAPFLFSWVYTSESGGFTS-AQDRQLLDSLVAQL-EAK 69

Query: 66  QDKKYPVYRGRYSSPAYPKKEIRPAAFDPNTADSATFLSLGLPTWMAGNILRYRRKQGRF 125
           Q    P  + +Y         +RP  F+PN      + + GLP ++A  IL YR K G  
Sbjct: 70  Q----PEPKAKYGVATVA---LRP--FNPNQLTVEEWQAFGLPRYLAQRILNYRSKVGDL 120

Query: 126 RRPEDFRKIYGLTEEQYRTLQPYIRIAET-PVLQDTSRILVVQATAPYDTLMKYPPG--- 181
               +  KIYGL +  ++ L PYI++ E  P           Q TA  +     P     
Sbjct: 121 TYKAELGKIYGLPDSVFQRLYPYIQLPEERPNKYKPGAYAGRQPTANPNWSSSRPAREKF 180

Query: 182 --TIIDLNQADTTELKKIPGIGSRIARSIVNHRRLLGGFYQIEQLGEI-RLKAE---KLR 235
                ++N ADTT+LK+I GIGS+++  IV +R  LGGFY + QL E+  L+ E    L+
Sbjct: 181 ILAPFNVNTADTTQLKQIRGIGSKLSSRIVKYRSGLGGFYSMAQLQEVYGLQPEVVDSLQ 240

Query: 236 SWFSVDAGKI-HRININKASVERMMHHPYISYYQAKVIAEYRKKK---GKVRDLKQLMLY 291
            +  V  G   +++++N A+ + +  HPYIS   A+ I  YR++    G+V D++Q+ L 
Sbjct: 241 KYTFVAKGYAPNQLHLNTATADELKAHPYISSNVARAIVAYREQHGTYGQVEDVRQVKL- 299

Query: 292 EEFTPADFERMAPYV 306
              T   +E++ PY+
Sbjct: 300 --VTAELYEKLQPYL 312



 Score = 33.9 bits (76), Expect = 5e-06
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 111 MAGNILRYRRKQGRFRRPEDFRKIYGLTEEQYRTLQPYIRI 151
           +A  I+ YR + G + + ED R++  +T E Y  LQPY+ +
Sbjct: 274 VARAIVAYREQHGTYGQVEDVRQVKLVTAELYEKLQPYLAL 314