Pairwise Alignments

Query, 238 a.a., ThiF family protein, putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 268 a.a., tRNA threonylcarbamoyladenosine dehydratase from Escherichia fergusonii Becca

 Score =  139 bits (350), Expect = 6e-38
 Identities = 90/253 (35%), Positives = 143/253 (56%), Gaps = 21/253 (8%)

Query: 6   WQQR---TELLLGEEKMKRIRASHVLVVGLGGVGAYAAEMLCRAGVGRMTIVDADTVQPA 62
           W+QR   T  L GE+ ++    +H+ VVG+GGVG++AAE L R G+G +T++D D V   
Sbjct: 9   WRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVT 68

Query: 63  NMNRQLPAMHSTLGMPKAEVLAARYKDINPDIELTVLPVYLKDENIPELLDSAKFDFIVD 122
           N NRQ+ A+   +G+ KAEV+A R + INP+  +TV+  ++  +N+ + + +A + +++D
Sbjct: 69  NTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYM-NAGYSYVID 127

Query: 123 AIDTISPKCFLIYEAMKRHIKIVSSMGAGAKSDITQICFADLWDTYHCGLSKAVRKRLQK 182
           AID++ PK  LI    +  I +V++ GAG + D TQI   DL  T    L+  +R+RL+ 
Sbjct: 128 AIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKS 187

Query: 183 -MGV----KRKLPV--VFSTE-----QAD-PKAVLLTDDERNKKSTC----GTVSYMPAV 225
             GV    K KL V  VFSTE     Q+D     +    E  K+  C    G  + + A 
Sbjct: 188 DFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGAATMVTAT 247

Query: 226 FGCYLAEYVIKRI 238
           FG     + +K++
Sbjct: 248 FGFVAVSHALKKM 260