Pairwise Alignments

Query, 711 a.a., Na+/H+ anti-porter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 563 a.a., Kef family K(+) transporter from Serratia liquefaciens MT49

 Score = 74.7 bits (182), Expect = 1e-17
 Identities = 121/518 (23%), Positives = 222/518 (42%), Gaps = 50/518 (9%)

Query: 23  LIIILFAPMILGRLHIPHIIGMILAGVLIGEH--GFHVLDRDSSFELFGKVGLYYIMFLA 80
           L++     M+  RL I  ++G + AGVL G    GF V D   + EL  ++G+  +MF  
Sbjct: 15  LVLAFLLGMLANRLRISPLVGYLAAGVLAGPFTPGF-VADTSLAPEL-AEIGVILLMFGV 72

Query: 81  GLEMDMEDFKKNRMKSVVFGLLTFLIPMALGIWSSMSMLGYGFLTAVLLA-SMYASHTLI 139
           GL   ++D    +  ++   +    +   LG+  S  +LG+  ++ ++    +  + T++
Sbjct: 73  GLHFSLKDLLAVKHIAIPGAVAQIAVATLLGMGLS-KLLGWDLISGLVFGLCLSTASTVV 131

Query: 140 AYPIISRYGLSRLRSVNITIGGTAI---TVTLALIILAVIGGMF------KGTVDGLFWV 190
               +    L   +   I IG   +    + L L++L   G M        G +     +
Sbjct: 132 LLRALEERQLIDSQRGQIAIGWLIVEDLAMVLTLVLLPAFGNMLGNDNASSGQLLTELAI 191

Query: 191 FLVAKVAFLGFLIIFFFPRIGRWFFRKYDDSVMQFVFVLAMVFLGGGL----MEFVGMEG 246
            +   +AF+  +I+    R+  W   K   +  + +F LA++ L  G+    ++   +  
Sbjct: 192 TIGKVIAFIALMIV-VGRRLVPWILAKTASTGSRELFTLAVLALALGIAYGAVKLFDVSF 250

Query: 247 ILGAFLAGLVLNRLIPHVSPLMNRLEFVGNAL---FIPYFLIGVGMIIDVRSLFTGGEAL 303
            LGAF AG+VLN      S L +R       L   F   F + VGM+ D   L    E L
Sbjct: 251 ALGAFFAGMVLNE-----SELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILI--NEPL 303

Query: 304 KVAVVMTVVATFSKWLAAWITQKIYRMQPNERSMIFGLSNAQA---AATLAAVLIGHEII 360
            V   + ++  F K  AA++  K++       ++    S AQ    A  LA + I   ++
Sbjct: 304 AVLATLAII-VFGKSAAAFLLVKMFG-HSKRTALTISASLAQIGEFAFILAGLGITLGMM 361

Query: 361 MENGERLLNDDVLNGTVVMILFTCVISSLVTERSARRFALNEDAQPEDKGAKKAMEQILI 420
            E+G  L    VL G ++ I+   ++ +L+    A+   + +    E   A +  +QI +
Sbjct: 362 SEHGRNL----VLAGAILSIMLNPLLFTLLERYLAKTETMEDQIMEE---AVEEEKQIPV 414

Query: 421 PVANPETIENLVNLALVIKDAKQKNGMIALNVINDNNSSENKELQGKRNLEKAAMIAAAA 480
            + N   +     +  ++  AK     I L VI   NS    E   ++ ++   ++  AA
Sbjct: 415 DMCNHALVVGYGRVGSLL-GAKLAEAGIPLVVI--ENSRPRVEALREQGIK--TVLGNAA 469

Query: 481 DVPVTMVSRYDLNIASGIIHTIKE-YEATDVVIGLHRK 517
           +  V  ++R  L+ A  ++ TI   YEA ++V     K
Sbjct: 470 NPEVMDLAR--LDCARWLLLTIPNGYEAGEIVASARTK 505



 Score = 25.4 bits (54), Expect = 0.008
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 10  LPITDPTWVFFLVLIIILFAPMILGRLHIPHIIGMILAGVLIGE 53
           LP+ D   V F V + +LF PMIL  ++ P  +   LA ++ G+
Sbjct: 275 LPLRDAFAVLFFVSVGMLFDPMIL--INEPLAVLATLAIIVFGK 316