Pairwise Alignments

Query, 1354 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1360 a.a., His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Y_Y_Y domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Two component regulator propeller./Bacterial regulatory helix-turn-helix proteins, AraC family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  491 bits (1263), Expect = e-142
 Identities = 378/1403 (26%), Positives = 661/1403 (47%), Gaps = 137/1403 (9%)

Query: 6    LLFLLFLSVTAVRTLGQNITFSHLT--------TDDGLSQFSVNSLYIDERGIIWIGTRE 57
            LLF+  LS+  V  LGQ+     LT         + GLS  +V ++Y D++G +WIGT +
Sbjct: 8    LLFIFCLSIQLV--LGQDNAQERLTGYERNYIGIESGLSNNAVTAIYQDKKGFVWIGTYD 65

Query: 58   GLNRYNGNDIKSFKLKKNDPNSLFSNTVLRITGNKNGKVYLLCTDGVAEFDMTTQRFKTL 117
            GLNRY+G D   F+ +  D +SL  N ++ I G++N +V++    G++ +D  T +F+  
Sbjct: 66   GLNRYDGYDFLVFRNQPRDTSSLVHNRIVSIYGDRN-EVWVGTKRGLSVYDYHTGKFQ-- 122

Query: 118  LQGNVDAIYYNEKLYIGKREEVFVFNENTNNFDLYYHLAGKDINLSCLHLDEKKNLWMGT 177
                  A YY +     KR      N N        H+ G+D             + + T
Sbjct: 123  ------ARYYEDPKT--KRRHKLTANIN--------HITGRD-----------GKIVVAT 155

Query: 178  TSNGVYCLSDDKQLSQPITKGNIASIYE--------DSSKELWIGSWEEGL-YRIRTNGT 228
               GV   +D   LS+          Y+        D    +W      GL  R   +  
Sbjct: 156  AGQGVMVRADGGPLSRVPLWDAGKRYYDYHAQGAAVDKDHNVWAFIQGYGLAVRKEEDSC 215

Query: 229  IDNFRHDPKNPNSICSDFVRSCCE-DNLGNLWIGTFHGLNRYDKSTGQFQLYTANDNKPD 287
                  D K+ N         C E D+ GN+WIG+ +GL R+      + LY A      
Sbjct: 216  FKVVLKDIKSAN---------CIELDSEGNIWIGSDYGLARFHVQQKDWYLYPAQ----- 261

Query: 288  GLTHSSIWCIVK-DEQGTLWLGTYFGGVNYFNPEYEIYTRYKVGDTEKEGLSSPIVGRMT 346
             +T + I  I+   + G +W+ T   G+       E     K G    + +S+ + G + 
Sbjct: 262  -ITKNKITDIMNVADDGQIWVATDGNGLLVLEKGSEKSYFLKEGTVPSDLVSNAVYG-LA 319

Query: 347  EDKDGNLWICTEGGGVNVYNRKNNTYRWYRHEEGKNSISHNNVKAIYYDRTEEIMWIGTH 406
             D+ G  W+ T  GGVN+  +K N +    + +   +   ++    +   + + +W+GT 
Sbjct: 320  LDRQGRKWVGTLRGGVNILEKKQNRFVTVHNPDNLVNGLPSDFILSFCQTSGDSLWVGTD 379

Query: 407  LGGLNKLDLRTNRFTVYRMKAGDPTTLPSDIVRDIVPYEDKLIIATQNG-VCLFNPATGT 465
             GG++  D + +R+T YR ++G P +LP+D V  IV  E+ L +AT  G VC ++     
Sbjct: 380  GGGVSIWDRKRDRYTNYRHRSGKPGSLPNDFVTAIVERENNLWLATYGGGVCRYDSRADA 439

Query: 466  CEHLFKDTKEGRNIGMVASLYIDKDETLWVSAT-GEGVYSY-----RFDTGKLTHYA--- 516
                     EG     +  L+ D+   LW + + GEG+Y Y     RFD   +  Y    
Sbjct: 440  FVPYTLSNPEGMAHWYIWVLFKDRSGDLWAATSNGEGLYRYNGQKDRFDFVDVGIYGIIS 499

Query: 517  ---------------HNPSIPNTLSNNN--------VNNIMQDSNGNLWFSTSGSGLDRY 553
                           H   +  ++  ++        V +IM     +L  +T GSG+ R+
Sbjct: 500  MAQDHNGDYWVGTFDHLVKLDLSVEQDHEVIDIGYPVRDIMSLGPEDLLVATEGSGIWRF 559

Query: 554  RKESNDFENFDMQKDGLSSDCIYEVFESSIQKGDLLLITNQGFSQFDYPQKKFYNYGTEN 613
                   + + +Q++GL ++ + ++     + G + + T +G ++FD   +KF ++   +
Sbjct: 560  DSGQGTAKTY-LQEEGLPNNSVLKMVGD--RNGKIWMSTYKGLAKFDPEGEKFTSFFASD 616

Query: 614  GFPLTAVNENALFVTHDGEVFLGGIQGMISFWEKKLHFTPKSYSIILSRLLVNGKEITAG 673
            G      N NA     DG++  GGI+G                 I L++L VN +    G
Sbjct: 617  GLQSNQFNYNAGIRLDDGKLAFGGIKGFNLIDPLHQKSEGSFPHIHLTQLRVNNQP---G 673

Query: 674  DDTGILEQSIAYTPEISLKADQSMFSIEYATSNFIPANRNEIVYRLEGFSDEWNHTDRKQ 733
               G   ++I    ++ L  DQSM S+++    +    +    Y +EG+ ++W H  +  
Sbjct: 674  HPDG---KTIFALDKLELPYDQSMVSLDFLALEYAHPEKIAYAYHMEGWDEKW-HFVKNS 729

Query: 734  TLITYTNLNPGKYTLVIKSDGDGIEEA----RLLIRVLPPWYETWWAYLIYTICTVSLLW 789
             +  Y+ L  G+YT  +++     E +     L I +LPPWY TWWAY +Y++    L  
Sbjct: 730  RMANYSKLREGEYTFHVRATNAQGEWSPQVVSLPISILPPWYRTWWAYGLYSVIVGGLAG 789

Query: 790  YLIQNYNSRIKLRESLKYEKKHIEDLEALNQSKLRFFTNISHEFRTPLTLIVGQVETLL- 848
             L+     + KL+  +   ++     + LN+ KL FFTNISHEFR+PLT+I+  ++ ++ 
Sbjct: 790  ILVLYQRKQDKLKYQVSLSREMARREKELNEKKLNFFTNISHEFRSPLTMIINPLKEVMY 849

Query: 849  ----QVQTFTPNIYHKILGIYKNSLQLRELITELLDFRKQEQGHMKIKVSRHNLVNFLYE 904
                Q++     +      +Y+NS +L  L+ +LL FRK +     +K+ + +++    E
Sbjct: 850  GERKQLEAGAVEV------VYRNSKRLLSLVDQLLLFRKVQTEVGNVKMVKLDVIGLCKE 903

Query: 905  NYLLFLEYASSKQINFKFNKQSDDIEVWYDQKQMQKVVNNLLSNALKHTKAED-TISINV 963
             +  F+ +A    I+++F+ + D  EV  D+++++  V NL+SNALK        + ++ 
Sbjct: 904  VFSCFIHHAKDLDISYQFHAELDSFEVVADRQKLEIAVFNLVSNALKFVPPHTGKVLVSA 963

Query: 964  SQEDKYVIIEIKDTGTGIAAAEIDKIFDRFYQTERLDSLNTGAGTGIGLALTKGIIELHH 1023
                    + ++D G GI   + ++IFD FYQ    +S +   G GIGL L K ++E H 
Sbjct: 964  VHASNRFTVTVEDNGKGIGEGDRERIFDLFYQG---NSQSGAKGFGIGLYLVKKLVEEHK 1020

Query: 1024 GTIRVESEPGKGSRFIITLKSGNQHFTEEQIIRDNADANIQQPPETIVPTVEILPDSEWK 1083
            G++ +      G++F I L +G  H   + ++ ++    +    E        +P     
Sbjct: 1021 GSVDLTDSTWGGAKFTIGLPTGKSH-VPDGLVHEDVGEQMVFLEELFDFENNHMPQKTET 1079

Query: 1084 EEDNKRIEDA------KMLIVEDNESIKQMLVGIFETFYQVTTASDGVEALDIIQKDMPS 1137
             +    I D       ++L V+DN  ++Q +  IFET +QV  A    +AL+I++     
Sbjct: 1080 WDGLATITDGVVTAKKRVLAVDDNPQLRQYIKRIFETQFQVVLAESAEQALEIVEGQEID 1139

Query: 1138 IILSDVVMPRMSGTELCKQVKTDFNTCHIPVVLLTARTAVEHNIEGLKIGADDYITKPFN 1197
            +I+SDVVM  M+G ELCK++K+     +IP+VLLTA  +    ++G+++GADDYITKPF+
Sbjct: 1140 LIISDVVMKGMNGVELCKELKSREEYRYIPMVLLTASASDSIKLKGIEVGADDYITKPFD 1199

Query: 1198 TNLLISRCNNLVNSRRLLQEKFSKQPQAFAQMLATNPMDKEMLDRAMAIIEQHLDNTDFN 1257
             N L++R   ++  +  +Q                +  DKE +D+ + +IE++LDN  F+
Sbjct: 1200 KNYLMARVKGILRQQESVQRHLLTSVSKKPTDRKLSKEDKEFIDKMVKVIEENLDNDGFS 1259

Query: 1258 VNIFAREMGMARTNLFTKLKAVTGQTPNDFILSIRLKKGAVMLRNNPELNITEISDRIGF 1317
            + + A +M M+ + L+ K+K  TG+T N+ I  +RL+  A  L    +  + E     G+
Sbjct: 1260 IQVLAVDMCMSHSMLYRKVKLATGKTVNEIIRFVRLRAIATTLITT-DAQVNEAVSSAGW 1318

Query: 1318 SSSRYFSKCFKEIYHVSPLAYRK 1340
               +YF K F + Y ++P A++K
Sbjct: 1319 HDLKYFRKQFSQQYGMTPSAFQK 1341