Pairwise Alignments

Query, 572 a.a., Outer membrane binding protein for chondroitin sulfate and hyaluronic acid (susD-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 542 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  114 bits (285), Expect = 1e-29
 Identities = 140/587 (23%), Positives = 244/587 (41%), Gaps = 79/587 (13%)

Query: 8   IIALLAGFSMVSCDFLDKEP-TKLTPENYFNTPAEANSFL----TGIYAILSQPTFYGGD 62
           I+A  A    VSC  LD+   ++L+ +N++N   E    +    T + A L+ PT   G 
Sbjct: 11  ILAPAAILGTVSCMDLDETIYSELSKDNFYNNKVEIMQGVLRPFTHMQAWLA-PTGQSGY 69

Query: 63  YMYLVAGDDLSHYGGSGRGPASTG----LICNNATTSDNAVTAFWYALYSGINRANMFLE 118
           Y +     D   +   GR     G    L  +  T+ +  + + W  +++G+   N  L 
Sbjct: 70  YYHGEMAADQVAWPQKGRHGYDGGDHIRLHYHTWTSQEPRLRSAWSLMWAGLGYVNSALS 129

Query: 119 NIDKVNGFDAGVKEQ----YIAEARFLRAFYYFNLVECWGDVPFKTVSTQSVTNLNIPRT 174
           +++ V+   AGV E+     +AE R +RA++Y  +++ WG+VP  T   + +   N P  
Sbjct: 130 DLESVDFAAAGVSEEEKQSLLAEVRVMRAYHYLKIMDMWGNVPIVTTVGEPI---NPPSA 186

Query: 175 DKQEIYDFIISEMADAAETGLKSASDLAYKPGRISQSTAWGILARVYLFRAGEHYREGRN 234
            +QE++ F+  E+ D  E     + +L    GR+S++  + +L+ +YL           N
Sbjct: 187 TRQEVFAFVEQELLDNVELLQPLSQELV---GRVSKAAGYSMLSELYL-----------N 232

Query: 235 ATQAEKKDYFERASFYAQKVM--TAGHKLAANYWDPFIDMCSDKYNTTANESIWEAEFAG 292
           A +      +++   Y+ KV+    G        DP I    +  N  + E+I++  F+ 
Sbjct: 233 AEKWTGTAMYDKCIEYSDKVIDGEGGSLTGTMELDPDILGPFNNTNHMSPENIFQFAFSR 292

Query: 293 NNTSDTQAEGRIGNIIGLAGPDLSSKSDVTGAKDPGYGYAFIYSTPKLYNLYVNNGDTKR 352
               +    G       +   ++S   DVT +     G+      P  ++ Y  N D ++
Sbjct: 293 KGGFEFNWGG-----FYVGYSNMSEVWDVTFS-----GWNAFVVIPSAFDAYAEN-DLRK 341

Query: 353 FNWSIAPFEYKEAGGKNTGVTHREFEQGKLAEVMSQYGQQRGTYQYADDTEKTTATKNFS 412
             W +   +YK   G N  V   E   G+    ++    +R +     +   T   +N  
Sbjct: 342 QEWFLFGTQYKY--GTNEPVLGTEEYDGQPLTYVNTI--RRNSEGATGEGSMTEGEENSG 397

Query: 413 RMCGKYRREYEADKKDKNYTSINFPILRYADVLLMIAEAENEANNGPTTL-AYQCMKEVR 471
               KYR      K+D+NY   ++ I R  ++    AEA    N G  T  A   +   +
Sbjct: 398 ARFNKYR---SGTKEDENYWENDYIIYRLTELYFNKAEAIMRQNGGTATQEAVDLINASK 454

Query: 472 ERAGLNELPDMTQEEFR------QTVKDERAMELCFEYTRRFDLIRWGEYVKNMRALVTE 525
           +RA      D   E++         +  ER  E  FE  RR DLIR+GE+ +        
Sbjct: 455 QRA--FTAADWVNEQYTTATLTLDELLAERGREFIFEGKRRTDLIRFGEFTQ-------- 504

Query: 526 AQSGNNWTQGPTNVYTYFNISSTYNYFPIPDAEMSVNKDITQNNPGW 572
              G+ W    TN             FPIP  + ++N ++ Q NPG+
Sbjct: 505 ---GSWWDHEATN-------DPNRELFPIPHVQTALNPNLEQ-NPGY 540