Pairwise Alignments

Query, 572 a.a., Outer membrane binding protein for chondroitin sulfate and hyaluronic acid (susD-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 671 a.a., SusD family protein from Bacteroides ovatus ATCC 8483

 Score =  124 bits (311), Expect = 1e-32
 Identities = 146/541 (26%), Positives = 231/541 (42%), Gaps = 93/541 (17%)

Query: 21  DFLDKE-PTKLTPENYFNTPAEANSFLTGIYAILSQPTFYGGDYMYLVAGDDLSHYGGSG 79
           +FLD E P+  + EN F + A   + L G+YA ++    YG        G      G   
Sbjct: 3   NFLDTESPSIPSDENLFKSTALTEAALMGVYATMTDTYIYGQKLCVNWQGASDVEVGS-- 60

Query: 80  RGPASTGLICNNATTSDNAVTAF----------WYALYSGINRANMFLENIDKV----NG 125
            G  ST     N+T  D     F          W  LY     A   ++ I +     + 
Sbjct: 61  -GAFSTENY--NSTLRDEGAGNFYDDNYNRNTRWDKLYYLAESATTIVDGIRRSPLMQST 117

Query: 126 FDAGVKEQYIAEARFLRAFYYFNLVECWGDVPFKTVSTQS-VTNLNIPRTDKQEIYDFII 184
            D     +Y+ EA  L+A  YF L+  WGDVP+K  +++S + N+ I + D+  +Y++II
Sbjct: 118 SDKAAMRRYLGEALALKALGYFELIRYWGDVPYKEHASESGLGNVYIGKVDRDIVYNYII 177

Query: 185 SEMADAAETGLKSASDLAYKPGRISQSTAWGILARVYLFRAGEHYREGRNATQAEK---- 240
            ++ +A E  L    + +Y   R+++  A G+LA+V LF  G   R+G      +     
Sbjct: 178 EDLKEAIEY-LPWMGEESYTVERMNKGFAKGLLAKVALFAGGWSVRDGNQFPDLDVEHHP 236

Query: 241 ----------------KDYFERASFYAQKVMTA---GHKLAANYWDPFIDMCSDKYNTTA 281
                           KDY+E A+    +++ A    H+L  +Y + +  +   +YN   
Sbjct: 237 TIPEMNGYFVGRPKNWKDYYELAAKQCAEILGATDNPHELDPSYENIWSTVNHLEYN-KY 295

Query: 282 NESIWEAEFAGNNTSDTQAEGRIGNIIGLAGPDLSSKSDVTGAKDPGYGYAFIYSTPKLY 341
           NE+++E  F          EG+ G++    G +L+     T     G GYA   +T   Y
Sbjct: 296 NENLFEVAF---------GEGQNGDVGATMGYNLNRGVFNTTQGMGGAGYA---ATTAYY 343

Query: 342 NLYVNNGDTKRFNWSIAPFEYKEAGGKNTGVTHREFEQGKLAEVMSQYGQQRGTYQYADD 401
               +  DT+R + +    EY    GKN  V        +   +    G+ R  Y   D+
Sbjct: 344 FYSFDPADTRR-DVTCVFQEYINENGKNKEVI-------RCNPLGVACGKWR-WYWMTDN 394

Query: 402 TEKTTATKNFSRMCGKYRREYEADKKDKNYTSINFPILRYADVLLMIAEAENEANNGPTT 461
             K    K  SR+                 T IN+ ++RY+D+ LM AEA+N    GP  
Sbjct: 395 YMKVRFPKANSRIA----------------TGINWILMRYSDIYLMFAEAQN-VLTGPDA 437

Query: 462 LA-------YQCMKEVRERAGLNELPDMTQ--EEFRQTVKDERAMELCFEYTRRFDLIRW 512
           ++        Q +++VRERA     P++TQ   +F   + +ERA E   E  RR DL RW
Sbjct: 438 VSPIAGMSPRQALEKVRERAFGTGAPEITQYDADFFTAIVNERAWEFGCESIRRQDLTRW 497

Query: 513 G 513
           G
Sbjct: 498 G 498