Pairwise Alignments

Query, 572 a.a., Outer membrane binding protein for chondroitin sulfate and hyaluronic acid (susD-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 588 a.a., SusD family protein from Bacteroides ovatus ATCC 8483

 Score =  155 bits (393), Expect = 3e-42
 Identities = 166/623 (26%), Positives = 247/623 (39%), Gaps = 113/623 (18%)

Query: 11  LLAGFSMVSCD-FLDKEPTK-LTPENYFNTPAEANSFLTGIYAILSQPTFYGGDYMYLVA 68
           LL+G  M SC+  ++++P   + PE+  ++   A+ ++TG+Y  L +  F  G +   + 
Sbjct: 17  LLSGAVMTSCESMIEEKPFDFIVPEDVEDSDNGADMWVTGVYNTLHEAMFRYGSFPRPL- 75

Query: 69  GDDLSHYGGSGRGPASTGLICNNATTSDNAVTAFWYALYSGINRANMFLENIDKVNGFDA 128
             D  +  G+    +  G    N    D      W  +YS INRAN+ +  I+K+     
Sbjct: 76  DYDCDYISGAVWQFSQFG--SGNFQGGDGQADVLWTGMYSLINRANIAVSEINKMQNVSE 133

Query: 129 GVKEQYIAEARFLRAFYYFNLVECWGDVPFKTVS-TQSVTNLNIPRTDKQEIYDFIISEM 187
             K+  + E  FL+A+ YF LV  +G +P  +VS  +S    N PR    ++Y   I  +
Sbjct: 134 EFKKNALGECYFLKAWAYFYLVRAYGAIPIYSVSVNESGQYTNNPRIPIAQVYTETIIPL 193

Query: 188 ADAAETGLKSASDLAYKPGRISQSTAWGILARVYLFRAGEHYREGRNAT----------- 236
              A+  +   +D  +KPGR+  +TA G+LA+VY          G   T           
Sbjct: 194 LKDAKDMIYKNTDNGFKPGRVCAATAAGLLAKVYATIGSASMSTGEQITVKTGAPFVMQN 253

Query: 237 --------------------QAEKKDYFERASFYAQKVMTAGHKLAANY----------- 265
                               Q    + F    +Y      AG  +   Y           
Sbjct: 254 VNGTMTKVYTEPVPTTFSKDQVAGYESFSSQEYYRLAYEVAGDVIGGEYGTHKLEDYDLI 313

Query: 266 WDPFIDMCSDK---YNTTANESIWEAEFAGNNTSDTQAEGRIGN--IIGLAGPDLSSKSD 320
           W P    CS+      T + + ++   F+ +      A G I N   +G          +
Sbjct: 314 WSPSGKTCSEHLFGLQTKSGDELYGTLFSSHYCGRLNAAGNIDNSLTVGCRKHWYLLFEE 373

Query: 321 VTGAKDPGYGYAFIYSTPKLY----NLYVNNGDTKRFNWSIAPFEYKEAGGKNTGVTH-- 374
                D G  + +I           + Y N G  +R        E KE    N  VT   
Sbjct: 374 KDYRVDKGVLHCWIRQNSDTSWGGGSYYPNFGKWQRM------VEAKEPPFDNPKVTSGW 427

Query: 375 --REFEQGKLAEVMSQYGQQRGTYQYADDTEKTTATKNFSRMCGKYRREYEADKKDKNYT 432
              E    +     ++Y Q     Q AD T+  T                     D NY 
Sbjct: 428 RCDEAGSEQFFAFTTKYSQ-----QIADQTQPRT---------------------DANY- 460

Query: 433 SINFPILRYADVLLMIAEAENEANNGPTTLAYQCMKEVRERAGL--NELPDMTQE-EFRQ 489
               P LRYADV+L+ AEA NE  NGPT  +   + +VR R+     EL + T +   R 
Sbjct: 461 ----PFLRYADVVLIFAEAANEL-NGPTKESVDALNDVRTRSNATGKELANFTDKTSLRS 515

Query: 490 TVKDERAMELCFEYTRRFDLIRWGEYVKNMRALVTEAQSGNNWTQGPTNVYTYFNISSTY 549
            + +ERAMEL  E  RR+DLIRWG Y++ M AL       NN  Q           SS +
Sbjct: 516 AILEERAMELALEGDRRWDLIRWGIYLQAMNAL-GGMDEANNVKQR----------SSKH 564

Query: 550 NYFPIPDAEMSVNKDITQNNPGW 572
             FPIP  E+  N+ I +NNPGW
Sbjct: 565 LLFPIPTLEILTNQGINENNPGW 587