Pairwise Alignments

Query, 572 a.a., Outer membrane binding protein for chondroitin sulfate and hyaluronic acid (susD-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 529 a.a., SusD family protein from Bacteroides ovatus ATCC 8483

 Score =  113 bits (282), Expect = 2e-29
 Identities = 143/578 (24%), Positives = 237/578 (41%), Gaps = 88/578 (15%)

Query: 10  ALLAGFSMVSCD-FLDKEPT-KLTPENYFNTPAEANSFLTGIYAILSQPTFYGGDYMYLV 67
           ALL    + SCD FL + P  +LT  N F +  +A + +   Y  + +       + Y++
Sbjct: 24  ALLLNVGLTSCDSFLTETPQGELTEANAFTSIKDAEALIISCYDGIQKGHEEYYMWYYMI 83

Query: 68  AGDDLSHYGGSGRGPASTGLICNNATTSDNAVTA-FWYALYSGINRANMFLENIDKVNG- 125
             D  +    SG        +     T  NAV    W +LY  I R N+ L+ I ++N  
Sbjct: 84  LADCFADNAYSGGDDVDINNVFLRDLTPRNAVVMKSWKSLYGSIMRCNVALKYIPQINDP 143

Query: 126 -FDA----GV--KEQYIAEARFLRAFYYFNLVECWGDVP-FKTVSTQSVTNLNIPRTD-K 176
             DA    GV  +E+ + EA FLRA +YFNLV+ WG VP   T  + +  ++ +PR D +
Sbjct: 144 LLDAEAFTGVSKREEMLGEASFLRALHYFNLVKTWGCVPVVTTTGSTAPADVQVPRADSE 203

Query: 177 QEIYDFIISEMADAAETGLKSASDLAYKPGRISQSTAWGILARVYLFRAGEHYREGRNAT 236
           +E+Y  II ++  A        +  A   G  S+     + A+VY  +      E     
Sbjct: 204 EEVYARIIEDLEFALTRLPDKRATEAETRGFASKGAVNALFAKVYATKGAPGNVE----- 258

Query: 237 QAEKKDYFERASFYAQKVMTAG-HKLAANYWDPFIDMCSDKYNTTANESIWEAEFAGNNT 295
                  +++   Y++ VM +  ++L   Y     D   D  +   +E+I   ++  N+T
Sbjct: 259 -------WDKVKTYSEAVMNSPVYRLVDTY-----DHLFDDEHRNNSETILAVQYIANST 306

Query: 296 SDTQAEGRIGNIIGLAGPDLSSKSDVTGAKDPGYGYAFIYSTPKLYNLYVNNGDTKRFNW 355
            +          + L  P ++ ++             ++  +  L   + + GD  R N 
Sbjct: 307 ENNYVP------VLLLPPSMTEQN----------WRKYLTPSQSLLKAFDDEGDQVRKN- 349

Query: 356 SIAPFEYKEAGGKNTGVTHREFEQGKLAEVMSQYGQQRGTYQYADDTEKTTATKNFSRMC 415
           S   FE          + +  F+Q                Y    + +  T T  F   C
Sbjct: 350 STVIFE---------DINNIWFDQ---------------YYAQLKNGQWETRTLPFPYKC 385

Query: 416 GKYRREYEADKKDKNYTSINFPILRYADVLLMIAEAENEANNGPTTLAYQCMKEVRERAG 475
            + +     D  D  Y      I R AD++L+ AEA N  +   T +A   ++++R R G
Sbjct: 386 -RAKNRVGWDCGDLIY------IFRLADIVLLHAEAVNALSGPATAIAEPNLQKIRTRIG 438

Query: 476 LNELPDMTQEEFRQTVKDERAMELCFEYTRRFDLIRWGEYVKNMRALV-TEAQSGNNWTQ 534
           L EL   ++EE  + +  ER +EL +E  R FDL R+G     + +L  +E   G   T 
Sbjct: 439 LQELNASSREELTRLLLKERRLELAYEGERFFDLKRYGIAQSTLSSLTWSEIVDGEQTT- 497

Query: 535 GPTNVYTYFNISSTYNYFPIPDAEMSVNKDITQNNPGW 572
                       +     PIP  E   N ++TQ NPG+
Sbjct: 498 ------VTGKFPAHMLLMPIPQEERDRNPNLTQ-NPGY 528