Pairwise Alignments

Query, 279 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 314 a.a., 16S RNA G1207 methylase RsmC from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 48/229 (20%), Positives = 82/229 (35%), Gaps = 31/229 (13%)

Query: 7   YASGEQFELCSCEDCGFTFTQGVPVEAEIGKYYETPDY-----------------ISHTD 49
           + + ++F    C DC       +P   ++G YY    Y                 + +  
Sbjct: 28  FGTRDEFTYLECSDCQAIQLTSLP--DDLGTYYPADYYSLGEINLSSWPVRRLKQLRYAL 85

Query: 50  TRKGAMNTIYHYVRSYMLGRKARLVAREAHRKRGRLLDIGTGTGYFADTMARRGW-KVEA 108
            R   MN   HY     L + A  +          +LD+G G G     +   G   +  
Sbjct: 86  FRLTNMNIFKHYHYGDWLEKLALPLDSS-------ILDLGCGNGQLLYELFPCGHTNLVG 138

Query: 109 VEKSPQARAFAKEHFDLDVKPESALKEFAPGSFDVITLWHVMEHLEHLNETWEMLRELLT 168
           ++   +      +H  L  K    ++E     FD I + H  EH++      +   ELL 
Sbjct: 139 MDPFMEKSQRINQHIRLLKKSIYEVEE----KFDCIMMHHSFEHMDQPKAVIDRAVELLN 194

Query: 169 EKGMLIVAVPNCSSYDAGRYGEYWAAYDVPRHLWHFTPVTIQQLASRHG 217
             G L++ +P         YG  W   D PRHL+  +  ++++L    G
Sbjct: 195 PNGKLLIRIPVAQKAAWKTYGTDWVQLDAPRHLFIHSETSLKKLTEDTG 243