Pairwise Alignments

Query, 316 a.a., mobilization protein BmgA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 391 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  103 bits (256), Expect = 9e-27
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 24/269 (8%)

Query: 1   MIGKLKKGSSFGGCIRYVTGKDEAKIIASDGVLLGTNAE------ITQSFELQRQLNPRI 54
           MI K   G +F G + Y   K  A        +L TN        + +  EL + +NP +
Sbjct: 1   MIAKQSIGKNFMGALDYNLKKMVASDEGKRAEVLETNFTSLDREMVQREVELMKSMNPGL 60

Query: 55  KKPVGHIALSFKPEDKPRLTDEFMTKIAIEYMQMMGITKTQFIIIRHHNADNPHCHIVYN 114
           K+   H++LSF  E+K  +++  M  IA EY++ MG     ++I RHH+AD+ HCH++  
Sbjct: 61  KRNTYHVSLSFGKEEK--ISNAKMLSIAGEYLKGMGFDDNAYVIFRHHDADHSHCHLLAL 118

Query: 115 RINNESKLISDRNDYRRNEQVTKALKSKYGLTYGTDKSNTNTRKLRNAE----------R 164
           R   +  ++SD N++RR+E + + L+ KYGL           +     E           
Sbjct: 119 RNRFDGSVVSDSNNFRRSESLVRKLEKKYGLQQVKSSKEAKIKAPNKDEIEMVMRTGKPS 178

Query: 165 AKYEIHNAVKDALKMADSWEKLRSELAKRGVHLEFVYKDKAQTKVQGIRFCKDGYSFKGT 224
            K  +   V +AL   ++      ++   G +L  ++   +  +V G+ +C  G+  KG 
Sbjct: 179 KKMVLQQIVGEALNQTNTMADFIQKVEVAGANL--LFNQASTGRVSGVAYCYGGFKAKGQ 236

Query: 225 QICREYSFGKLNAKFEGTENHVSTRANSA 253
            +  ++ +  +      T N+  TR   A
Sbjct: 237 SLGNQFKWKNI----ANTLNYEQTRDRQA 261