Pairwise Alignments

Query, 316 a.a., mobilization protein BmgA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 429 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 77.4 bits (189), Expect = 6e-19
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 18/171 (10%)

Query: 1   MIGKLKKGSSFGGCIRYVTGKDEAKIIASDGVLLGTNA------------EITQSFELQR 48
           MI K+ + ++  G + Y    ++ K+   +G +L  N             ++ QSF    
Sbjct: 1   MIAKIGRSANLYGALAY----NQLKVEQENGKILFANKMIENASGHYSVPQLAQSFAPYL 56

Query: 49  QLNPRIKKPVGHIALSFKPEDKPRLTDEFMTKIAIEYMQMMGITKTQFIIIRHHNADNPH 108
             N   +K   HI+L+  P+DK  ++DE   K+A EYM+ MG     F++ +H + D  H
Sbjct: 57  IANRNTEKHTLHISLNPDPKDK--VSDEKFRKMAEEYMRGMGYGGQPFVVFKHTDIDRSH 114

Query: 109 CHIVYNRINNESKLISDRNDYRRNEQVTKALKSKYGLTYGTDKSNTNTRKL 159
            HIV   ++ + K ISD+ +  R+ +V + L+SKYGL   TDK      K+
Sbjct: 115 IHIVSVCVDEQGKKISDKFEKVRSMKVCRELESKYGLIPATDKERRLNEKI 165