Pairwise Alignments

Query, 316 a.a., mobilization protein BmgA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 392 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  116 bits (290), Expect = 1e-30
 Identities = 90/329 (27%), Positives = 145/329 (44%), Gaps = 56/329 (17%)

Query: 1   MIGKLKKGSSFGGCIRYVTGKDEAKIIASDGVLLGTNAE------ITQSFELQRQLNPRI 54
           MI K   G +F G + Y   K   K       +L TN        I +  EL + +NPR+
Sbjct: 1   MIAKQSIGKNFIGALDYNLKKLVVKDEGRRAEVLETNFTSLDREIIQKEVELMKSMNPRL 60

Query: 55  KKPVGHIALSFKPEDKPRLTDEFMTKIAIEYMQMMGITKTQFIIIRHHNADNPHCHIVYN 114
           K+   H++LSF  E+K  + +E M  IA EY++ MG     + I RHH+AD+PHCH++  
Sbjct: 61  KRNTYHVSLSFPKEEK--IPNEKMLSIAGEYLKGMGFDDNAYFIFRHHDADHPHCHLLTL 118

Query: 115 RINNESKLISDRNDYRRNEQVTKALKSKYGLTYGTDKSNTNTRKLRNAE----------R 164
           R   +  ++SD N+YR++E + + L+ KYGL           +     E           
Sbjct: 119 RNRFDGTVVSDSNNYRKSESLVRKLEKKYGLQQVKSSKEAKVKAPNKDEIEMVIRTGKPS 178

Query: 165 AKYEIHNAVKDALKMADSWEKLRSELAKRGVHLEFVYKDKAQTKVQGIRFCKDGYSFKGT 224
            K  +   V +ALK  ++ E    ++   G +L  ++   +  +V G+ +C DG+  KG 
Sbjct: 179 KKMVLQQIVGEALKQTNTIEDFIHQVEASGANL--LFNQASTGRVSGVAYCYDGFKAKGQ 236

Query: 225 QICREYSFGKLNAKFEGTENHVSTRANSAQQYEQGCRKNEQVPFMSENCQDPWDGISSIG 284
            +  ++ +  +              AN+   YEQ           + +CQ       +IG
Sbjct: 237 SLGNQFKWKNI--------------ANTL-HYEQ-----------TRDCQ-------AIG 263

Query: 285 LFASANAQTFESFPEDESAKKKKKKRRRG 313
               ANA+T   +P   S   KK  R  G
Sbjct: 264 ---QANARTTSKYPGGLSGNDKKTTRVHG 289