Pairwise Alignments

Query, 316 a.a., mobilization protein BmgA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 391 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  115 bits (287), Expect = 2e-30
 Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 25/286 (8%)

Query: 1   MIGKLKKGSSFGGCIRYVTGKDEAKIIASDGVLLGTNAE------ITQSFELQRQLNPRI 54
           MI K   G +F G + Y   K      +    +L TN        + +  EL + +NPR+
Sbjct: 1   MIAKQSIGKNFMGALDYNLKKMLTSDESKRAEVLETNFTSLDREMVKKEVELMKSMNPRL 60

Query: 55  KKPVGHIALSFKPEDKPRLTDEFMTKIAIEYMQMMGITKTQFIIIRHHNADNPHCHIVYN 114
           K+   H++LSF  E+K  ++++ M  I  EY++ MG     + I RHH+AD+PHCH++  
Sbjct: 61  KRNTYHVSLSFGKEEK--ISNDKMLAIGNEYLKGMGFDDNAYFIFRHHDADHPHCHLLAL 118

Query: 115 RINNESKLISDRNDYRRNEQVTKALKSKYGLTYGTDKSNTNTRKLRNAE----------R 164
           R   +  ++SD N+YRR+E + + L+ KYGL           +     E           
Sbjct: 119 RNRFDGTVVSDSNNYRRSESLVRKLEKKYGLQQVKSSKEAKVKAPNKDEIEMVMRTGKPS 178

Query: 165 AKYEIHNAVKDALKMADSWEKLRSELAKRGVHLEFVYKDKAQTKVQGIRFCKDGYSFKGT 224
            K  +   + +ALK  ++ E    ++   G +L  ++   +  +V G+ +C DG+  KG 
Sbjct: 179 KKMVLQQIISEALKRTNTIEDFIHQVEASGANL--LFNQASTGRVSGVAYCYDGFKAKGQ 236

Query: 225 QICREYSFGKL--NAKFEGTENHVS---TRANSAQQYEQGCRKNEQ 265
            +  ++ +  +     +E T +  +     A +  +Y +G   N++
Sbjct: 237 SLGNQFKWKNIANTLHYEQTRDRQAIGQANARTTSKYPRGLSGNDE 282