Pairwise Alignments

Query, 862 a.a., DNA mismatch repair protein mutS (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 877 a.a., DNA mismatch repair protein MutS from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 1016 bits (2628), Expect = 0.0
 Identities = 501/862 (58%), Positives = 650/862 (75%), Gaps = 2/862 (0%)

Query: 1   MMKQFLDLKAKHPDAVMLFRCGDFYETYSTDAIVASEILGITLTKRANGKGKTIEMAGFP 60
           +MKQ+  +KAKHP A++LFR GDFYET+  DAI AS+IL I LTKR NG      +AGFP
Sbjct: 12  LMKQYNAIKAKHPGALLLFRVGDFYETFGEDAIKASKILDIVLTKRGNGSASETALAGFP 71

Query: 61  HHALDTYLPKLIRAGKRVAICDQLEDPKLTKKLVKRGITELVTPGVSINDNVLNYKENNF 120
           HH+LDTYLPKL+RAG+RVAICDQLEDPK  K +VKRG+TELVTPGVS ND VL  + NN+
Sbjct: 72  HHSLDTYLPKLVRAGERVAICDQLEDPKTVKGIVKRGVTELVTPGVSFNDQVLERRSNNY 131

Query: 121 LAAVHFGKASCGVAFLDISTGEFLTAEGPFDYVDKLLNNFGPKEILFERGKRLMFEGNFG 180
           LAAVHFGK   GV+FLD+STGEF+TA+G   Y+ KLL +  P E+LF + ++  F   +G
Sbjct: 132 LAAVHFGKTETGVSFLDVSTGEFITAQGDKSYIGKLLQSLAPAEVLFCKREKETFFERYG 191

Query: 181 SKFFTFELDDWVFTESTAREKLLKHFETKNLKGFGVEHLKNGIIASGAILQYLTMTQHTQ 240
             F  + L++WVF    A E L + F T +LKGFG+E ++ GI+++GAIL YL+ TQH +
Sbjct: 192 PDFRYYALEEWVFNYDFAYESLTRQFSTASLKGFGIEGMREGIVSAGAILHYLSETQHNE 251

Query: 241 IGHITSLARIEEDKYVRLDKFTVRSLELIGSMNDGGSSLLNVIDRTISPMGARLLKRWMV 300
           I HI +++R+EEDKYV LD+FTVR+LEL+   +  G  L+NV+D+T++PMGARLLK+W+V
Sbjct: 252 ISHIATISRLEEDKYVWLDRFTVRNLELVYPQHPEGVPLINVLDQTVTPMGARLLKKWVV 311

Query: 301 FPLKDEKPINDRLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSPREVVQLK 360
            PLKD   I  RL+ VE   +  +  E +   L  I DLER+ISKVAV RV+PRE+VQL 
Sbjct: 312 LPLKDVTQIRRRLDTVEALTQHQELLEELVLHLKQINDLERLISKVAVRRVNPRELVQLA 371

Query: 361 VALQAIEPIKQACLEADNASLNRIGEQLNLCISIRDRIAKEINNDPPLLINKGGVIKDGV 420
            AL+AI PI++    +D  +L ++  QL  C  +R+ I   +  +PP+L N+G +I +GV
Sbjct: 372 KALEAILPIQKVLALSDIPALQKLAAQLAPCDGLREEIRNVLKPEPPMLTNQGNMINEGV 431

Query: 421 NEELDELRRISYSGKDYLLQIQQRESEQTGIPSLKVAYNNVFGYYIEVRNIHKDKVPQEW 480
           NEELDELR I++SGKDYL Q+QQRE + TGI SLK+AYN VFGYY+EV + HKDKVP  W
Sbjct: 432 NEELDELRAIAFSGKDYLAQLQQREIKNTGISSLKIAYNKVFGYYLEVTHAHKDKVPSTW 491

Query: 481 IRKQTLVNAERYITQELKVYEEKILGAEDKILVLETQLYTDLVQALTEFIPQIQINANQI 540
           IRKQTLVNAERYIT+ELK YEEKIL AE++I  +E  L+ +LV    +++ Q+Q NA  I
Sbjct: 492 IRKQTLVNAERYITEELKTYEEKILNAEERIYTIEFGLFNELVLYAMDYVAQVQQNAKVI 551

Query: 541 ARLDCLLSFANVARENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSAS 600
             +DCL +FA +A  ++Y++P + D  VLDIR+GRHPVIEKQLP+GE Y+ ND+ LD   
Sbjct: 552 GVIDCLSAFAGIALSSSYVKPEVNDTHVLDIRKGRHPVIEKQLPLGEAYVPNDIFLDDEQ 611

Query: 601 QQIIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVG 660
           QQ+IIITGPNMAGKSALLRQTAL+ L+AQIGSFVPAE+A IG++DKIFTRVGASDN+S G
Sbjct: 612 QQVIIITGPNMAGKSALLRQTALVVLMAQIGSFVPAEAATIGVIDKIFTRVGASDNLSKG 671

Query: 661 ESTFMVEMNEAADILNNVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTL 720
           ESTFMVEM E A ILNN+S RSLVL DE+GRGTSTYDGISIAWAIVE++H HPK KA+TL
Sbjct: 672 ESTFMVEMTETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWAIVEHLHNHPKYKAKTL 731

Query: 721 FATHYHELNEMEKSFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIHVAKMAGMPKS 780
           FATHYHELN++ +   R+KNYNVSV+E   K++F+RKL  GGSEHSFGIHVA+MAGMP +
Sbjct: 732 FATHYHELNQLAEELPRVKNYNVSVREAGGKILFMRKLVPGGSEHSFGIHVAQMAGMPNN 791

Query: 781 IVKRANTILKQLESDNRQQGISGKPLTEVSENRSGMQLSFFQLDDPILCQIRDEILNLDV 840
           +V RA+ I+  LE +   +    + +    +N    QLS F+L DP L ++++ +  LD+
Sbjct: 792 VVLRADEIMHHLEKEKVSEQAPQQKMKTAPKN--NFQLSMFELHDPQLERVKELMEQLDI 849

Query: 841 NNLTPIEALNKLNDIKKIVRGK 862
           N +TP+EAL KLN++K +++ K
Sbjct: 850 NTITPVEALLKLNELKLLLQDK 871