Pairwise Alignments

Query, 1061 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1018 a.a., Outer membrane receptor proteins, mostly Fe transport from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  507 bits (1306), Expect = e-147
 Identities = 354/1076 (32%), Positives = 555/1076 (51%), Gaps = 88/1076 (8%)

Query: 9    KQKIRFKLTDRYLVLLICFLGYIS-TVSAQSHKISGVVVDEGKSPIIGATIQVKGANNGT 67
            ++ +R++     L  LI F+G  S  VSAQ   I+G V      P+ GA + V+G   G+
Sbjct: 8    RKPVRYQKGIWKLATLIIFIGCFSGNVSAQDLIITGTVRAPTGEPLPGANVSVRGTTQGS 67

Query: 68   ITDIDGNFSLEVKNPKAQLQISYIGFTTITVPVQLKGKMTITMQEASRNLDEVVVIGYGT 127
            IT++DG FS+EV + ++ L  S+IG+ +  + V  +  + + ++E    L+EVVV+GYG+
Sbjct: 68   ITNLDGEFSIEVPSRESLLVFSFIGYASHEMKVGNQTTINVVLEENLSALNEVVVVGYGS 127

Query: 128  VRKSDLSGSVSAVSMKNEAEIMPITSADQFLQGRIAGVSIAANSGAPGAGMNIQIRGVST 187
              ++ ++G++S+VS +   E+ P+ +    +QGR A VS+  N+GAPGA   ++IRG+ T
Sbjct: 128  QERAKVTGAISSVSAEEIREL-PVPNLASAMQGRAANVSVT-NAGAPGADPVVRIRGIGT 185

Query: 188  LSGNTDPLYVVDGFPIEAATASVNGGTSELSQQPAMNPLASINPNDIESIQVLKDASATA 247
            + GN DPLYV+DG P                       L  INP DIESI+VLKDAS  A
Sbjct: 186  V-GNNDPLYVIDGMPASG--------------------LNQINPADIESIEVLKDASTAA 224

Query: 248  IYGSRATNGVILITTKQGKEGKVNVNYNARVDISNISKRYNLLNAHDYALFENELDRTSN 307
            IYGSRA NGV+L+TTK+G +GK  V+ +A   + N  K  +LLN   Y  F  EL  T++
Sbjct: 225  IYGSRAANGVVLVTTKKGNKGKPKVSLDAYYGVQNAWKTLDLLNVDQYLDFGREL-LTNS 283

Query: 308  GYDMQGNVIPSTKVPRHTDDALERYKIYSTDWQDLMYQTAVSQDHQLAVNGGNKMTQYNI 367
            G D          +P+  +D L  +    TDWQD M+Q+A  QD+ ++V+GG + + YNI
Sbjct: 284  GDD----------IPQRFND-LGEFANVRTDWQDEMFQSAPIQDYNVSVSGGGESSLYNI 332

Query: 368  TAGYTDQEGIIMNTGLERYSFRLNLKSELAKRLVL--QLNTSYSQTEQKQTS--HSQSSS 423
            + GY  Q+GI+     ER SFR N + +L  R+ +   L  SY+    +  S   SQ   
Sbjct: 333  SMGYFAQDGIMKGVDFERVSFRANTQFDLGDRVSVGQTLTVSYTNRNDEPFSGGRSQMEH 392

Query: 424  MNQMVRRILTTKPTLMPGDQIYEDENVEYVPADNPYIMATELKDILQQRFFILNASLTYN 483
            M +MV  I    P+   G +  + E+      +NP + A   +D  Q    + +A +   
Sbjct: 393  MVKMVPYIPVRDPSRQGGFRATDTEDGS--DPENPVLNAALKQDRYQDFKILGSAYIDVK 450

Query: 484  FGKGLSWKGAGSFNRTDGSRSTYYPIGTNAGNSAHGMAFRGEDNRQNIV---LETTVNYD 540
              +G  +K     + T G R+ Y P+  NAG+    +       R + V        +Y+
Sbjct: 451  ILEGFHYKFMTGLDITTGQRNEYTPM-FNAGDFMFQVFAAISQTRNSYVSPLFSNQFSYN 509

Query: 541  RKFKKHHHINAVLGYTHEDRQRKTLAIQVGDFAGNDLLYYAIGE--GTNTMDKSSSVIQT 598
            + F  HH    +LG      +++T        +G + L   + E  G      +S   + 
Sbjct: 510  KDFGGHH--LDLLGVI----EKQTFISSSLTGSGQNELTNDVRELQGVQNQVTTSEKTEY 563

Query: 599  KLSSFLGRMNYTLYDRYIFTATGRYDGSSLLASGNRWSFFPSFAVAWRINQEKFMKDIPA 658
             L S++GR+NY    RY+ +A+ R DG S     N+W  FPS +  WRI++E FM+   A
Sbjct: 564  GLISYVGRVNYDYKQRYLLSASIRRDGGSRFGPDNKWGIFPSVSAGWRISEEGFMQSAGA 623

Query: 659  ISNIKLRLSYGVTGNQSIAYAAPLAIMNHVRSYS-GGAVTHGMVNGKLANPNLGWESTAT 717
            IS++KLR SYG TGN  I      A +N    Y+  G +  G     LAN +L WE+T  
Sbjct: 624  ISDLKLRASYGETGNDRIGDYVYQATINSNMFYNFNGTLAGGSTINALANEDLKWETTIM 683

Query: 718  YNAGLDLGFIDNRFRVTMNVYQRTTKDMLMNFGLPLSSGYGSIPY-NMGKMTNKGFELEA 776
             N GLDLG ++++   T   +   T+DM++   +P S G+   P  N+G + N+G E  A
Sbjct: 684  KNIGLDLGILNDQITFTAEWFDNKTEDMILGVPVPPSLGFDVAPVANVGTVRNRGMEFTA 743

Query: 777  SADILTGRVKWTLGGNI-YLNRNKVDDISGNELLGTSYLAGGGVFSQSIHITKAGYPVGS 835
                 TG  ++ + GNI ++N   +   SGN + G ++          +  T+ G P+  
Sbjct: 744  GYQKKTGSFQFGVNGNIGFVNNELISLGSGNSIFGPAFQ------GDPMTYTEEGKPIAY 797

Query: 836  FYGYVVDGVYQNEAEAKLAPFDTPQATPGSLRFKDISGPDGLPDGKITSDDMTIIGTAEP 895
            FYG+ V+G++Q   +        P A  G ++FKDI+G     DG I +DD T +G   P
Sbjct: 798  FYGWEVEGIFQTGEDTS----QQPNAQAGDIKFKDING-----DGVIGADDRTNLGHYMP 848

Query: 896  KFNYGINSELSWKGLTLSMIFTGRVGGDIANLNRYFLDSFTDTNDNIRAEAWEGRWQGEG 955
             F YG+N   ++K   LS+   G  G +I +  R+  +  +   +   +     RW    
Sbjct: 849  DFTYGLNFNANFKNFDLSLFLQGVQGNEIYSNIRFHTEGMSRLFN--ASTVVLDRWTPNN 906

Query: 956  TSNFYP-AVNGSQGSSYFNKRFSTFLLEDGSFFRLKNLTLAYQF------SLKKLRWLRS 1008
            T    P AV+G       N R S+  +EDGS+ RLKNL+L Y        S+ K   + +
Sbjct: 907  TQTDVPRAVSGDPNG---NARASSRWVEDGSYARLKNLSLGYTVPDAFLQSIAK-NSISN 962

Query: 1009 VRVFGTVTNVFTITNYSGYDPEVSITS---GAMSPNVDYAAYPSSRTYSMGINLAF 1061
            +R++ +  N+FTIT+YSGYDPE+++ +    ++   +D+  +P++RT+  GI L F
Sbjct: 963  LRIYVSAQNLFTITDYSGYDPEIAVRTEIDQSLGMGIDFGQFPAARTFLGGIQLTF 1018