Pairwise Alignments

Query, 1061 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1035 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  531 bits (1369), Expect = e-155
 Identities = 332/1045 (31%), Positives = 537/1045 (51%), Gaps = 87/1045 (8%)

Query: 33   TVSAQSHKISGVVVDEGKSPIIGATIQVKGANNGTITDIDGNFSLEVKNPKAQ--LQISY 90
            TV   +  + G V D+  + + GAT+Q+KG + GTITD  GN+++ +    ++  L  S+
Sbjct: 62   TVPPSTRTVKGKVTDQEGASLPGATVQIKGTDTGTITDEQGNYTIRLSGGSSEQVLVFSF 121

Query: 91   IGFTTITVPVQLKGKMTITMQEASRNLDEVVVIGYGTVRKSDLSGSVSAVSMKNEAEIMP 150
            +GF    V V  + ++ +T+    + L+EVVVIGYG+ RK+DL+G++S VS + E    P
Sbjct: 122  VGFQGKEVAVGNQSQVDVTLGSEEKELEEVVVIGYGSARKADLTGAISQVSTE-EVNAFP 180

Query: 151  ITSADQFLQGRIAGVSIAANSGAPGAGMNIQIRGVSTLSGNTDPLYVVDGFPIEAATASV 210
             TS  Q L GR  GV +  N G+PG G++I+IRG +++ G+  PLYV+DGFP        
Sbjct: 181  TTSVVQALAGRAPGVQVVQNDGSPGGGVDIRIRGSNSIQGDNSPLYVIDGFPYSG----- 235

Query: 211  NGGTSELSQQPAMNPLASINPNDIESIQVLKDASATAIYGSRATNGVILITTKQGKEGKV 270
                         NP  ++N +DI SI+VLKDASATAIYGSR  NGV+LITTK G +   
Sbjct: 236  -------------NP-TNLNNSDIASIEVLKDASATAIYGSRGANGVVLITTKGGVQAPT 281

Query: 271  NVNYNARVDISNISKRYNLLNAHDYALFENELDRTSNGYDMQGNVIPSTKVPRHTDDALE 330
             V +++   + ++ K+ +L+N   Y    N +   ++G D           P  ++  L 
Sbjct: 282  QVEFDSYYSVQHLRKKLDLMNGRQYGQLMN-IQAANDGLD-----------PYFSESELS 329

Query: 331  RYKIYSTDWQDLMYQTAVSQDHQLAVNGGNKMTQYNITAGYTDQEGIIMNTGLERYSFRL 390
                  TDWQD ++  A  +   + V+GGN+ T++++     DQEGII  +   RY+ + 
Sbjct: 330  AMDT-GTDWQDQVFDRAPIKSSSIRVSGGNESTRFSVGGSIFDQEGIIRGSDYNRYALQS 388

Query: 391  NLKSELAKRLVLQLNTSYSQTEQKQTSHSQSSSMNQMVRRILTTKPTLMP----GDQIYE 446
            ++   L+ +L +  +T+ ++    +      +  N M+   L   P   P    G     
Sbjct: 389  SIHHSLSDKLTIDFSTNLTKLTTARRDSDGGARGNSMIGAALVASPLSSPYAPDGSLTVL 448

Query: 447  DENVEYVPAD--NPYIMATELKDILQQRFFILNASLTYNFGKGLSWKGAGSF----NRTD 500
             E+  +V  D  NP     E  + +     + NAS++Y     L+ K  G      +RTD
Sbjct: 449  SEDFPFVSPDIINPLNYINEEFNTVNANIVLANASVSYRPIPKLTIKILGGIENRDDRTD 508

Query: 501  GSRSTYYPIGTNAGNSAHGMAFRGEDNRQNIVLETTVNYDRKFKKHHHINAVLGYTHEDR 560
              R+T + I ++   S +   +    N      E T++Y     + H  + + G+T++D 
Sbjct: 509  VYRTTDF-INSDGNASVNTRQYISRLN------ENTISYADTLDEKHKFDVLAGFTYQDF 561

Query: 561  QRKTLAIQ----VGDFAGNDLLYYAIGEGTNTMDKSSSVIQTKLSSFLGRMNYTLYDRYI 616
            Q + LA      + D  G D L  A   G  T   + SV    L S++GR+NY   D+Y+
Sbjct: 562  QTRYLAGSSAGFLSDLFGTDNLGAANTPGVPTSGYAKSV----LLSYIGRLNYNYADKYL 617

Query: 617  FTATGRYDGSSLLASGNRWSFFPSFAVAWRINQEKFMKDIPAISNIKLRLSYGVTGNQSI 676
            FTAT R DGSS  + GN+W  FPS A+AWR++QE FM+    +S +K+R S+G+TG+Q+I
Sbjct: 618  FTATWRADGSSRYSEGNKWGHFPSAALAWRVSQEGFMQQQQVVSELKIRTSWGLTGSQAI 677

Query: 677  AYAAPLAIMNHVRSYSGGAVTHGMVNGKLANPNLGWESTATYNAGLDLGFIDNRFRVTMN 736
               + L  +    +  G  +        +   +L WE+T  ++ GLDLG I  R  +  +
Sbjct: 678  DPYSTLNRLFPGYTVFGEELYSTFAPQSVLPGDLKWETTEQFDVGLDLGLIGGRIMLGAD 737

Query: 737  VYQRTTKDMLMNFGLPLSSGYGSIPYNMGKMTNKGFELEASADILTGRVKWTLGGNIYLN 796
             Y + T+D+L    LP S GY +   N+G++ NKG EL   A +L     W L GNI  N
Sbjct: 738  YYIKNTRDLLSTVRLPSSFGYTTTVANVGEIQNKGLELSMDAIVLNRGFHWNLSGNIAFN 797

Query: 797  RNKVDDISGNELLGTSYLAGGGVFSQSIHITKAGYPVGSFYGYVVDGVYQNEAEAKLAPF 856
            RN+V  ++  E + T+Y+    V + +  I + G P+G F+GY  DG  ++         
Sbjct: 798  RNRVISLNDGEPILTNYINVVTV-ADNFSIMEEGRPLGQFWGYQEDGYTED--------- 847

Query: 857  DTPQATPGSLRFKDISGPDGLPDGKITSDDMTIIGTAEPKFNYGINSELSWKGLTLSMIF 916
                   G++R++D++G     DG+I   D T IG   P F YGINS +++K   L +  
Sbjct: 848  -------GNIRYRDLNG-----DGEINESDKTAIGDPNPDFYYGINSTMTFKNFQLDLFL 895

Query: 917  TGRVGGDIANLNRYFLDSFTDTNDNIRAEAWEGRWQGEGTSNFYPAVNGSQGSSYFNKRF 976
             G  G DI N++            N+  E     W  E T   YP ++ +      + + 
Sbjct: 896  QGTKGNDIFNVSAISSTMDFGQGLNMPEEVLLDHWTAENTDAKYPRISRNN-----DLKV 950

Query: 977  STFLLEDGSFFRLKNLTLAYQFSLKKLRWLRSVRVFGTVTNVFTITNYSGYDPEVSITSG 1036
            S   +EDGS+ R+KN+ LAY F+  + +W+ +++++ +  N+ T T+YS +DPEV+    
Sbjct: 951  SDRYVEDGSYLRVKNIQLAYDFAFPESKWIGNLKLYVSGQNLLTFTDYSWWDPEVNSNGA 1010

Query: 1037 AMSPNVDYAAYPSSRTYSMGINLAF 1061
              S  +D+ +YP  ++Y++G+   F
Sbjct: 1011 DASLGIDHFSYPIPKSYTVGLRATF 1035