Pairwise Alignments

Query, 1061 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1021 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  529 bits (1363), Expect = e-154
 Identities = 357/1053 (33%), Positives = 532/1053 (50%), Gaps = 96/1053 (9%)

Query: 31   ISTVSAQSHKISGVVVD-EGKSPIIGATIQVKGANNGTITDIDGNFSLEVKNPKAQLQIS 89
            I +  A    I+G VV  E  SP+ G +I +KG+  GT+TDIDG F+LEV +  A L  S
Sbjct: 43   IRSTHAMEKVITGTVVSSEDNSPLPGVSILLKGSGTGTVTDIDGKFTLEVPDEGAVLIFS 102

Query: 90   YIGFTTITVPVQLKGKMTITMQEASRNLDEVVVIGYGTVRKSDLSGSVSAVSMKNEAEIM 149
             IGF    V V  +  + ITM+   + L EVVV+GYGT RK D++G+V++V  K+    M
Sbjct: 103  SIGFVKQEVSVGDQTNLNITMEADLQQLGEVVVVGYGTQRKKDITGAVASVGEKDFNTGM 162

Query: 150  PITSADQFLQGRIAGVSIAANSGAPGAGMNIQIRGVSTLSGNTDPLYVVDGFPIEAATA- 208
             + + +Q +QG++AGV+I  NSG PGA   ++IRGV+++S   DPLYV+DG P++  +A 
Sbjct: 163  SV-APEQLMQGKVAGVNIVQNSGQPGAASTVRIRGVNSISAGNDPLYVIDGVPMQFNSAN 221

Query: 209  ---SVNGGTSELSQQPAMNPLASINPNDIESIQVLKDASATAIYGSRATNGVILITTKQG 265
               S   G+S  S +   NPL SINP+DIESI +LKDASATAIYGSR  NGVI+ITTK  
Sbjct: 222  NFVSSMQGSSPFSSE-GTNPLNSINPSDIESIDILKDASATAIYGSRGANGVIIITTK-N 279

Query: 266  KEGKVNVNYNARVDISNISKRYNLLNAHDYALFENELDRTSNGYDMQGNVIPSTKVPRHT 325
            K G   + Y+  V +SNI K   +L+A  Y  +  E     NG +             + 
Sbjct: 280  KSGGETLTYDTYVGVSNIRKTLPVLSADQYRNYAEE-----NGLN-------------YP 321

Query: 326  DDALERYKIYSTDWQDLMYQTAVSQDHQLAVNGGNKMTQYNITAGYTDQEGIIMNTGLER 385
            D+        +T WQD ++++AVSQ+H +A  GG+  + +  + GYTDQ+GI++++GL++
Sbjct: 322  DEGA------NTFWQDEIFRSAVSQNHNVAFGGGSAASTFRASLGYTDQQGILLSSGLKK 375

Query: 386  YSFRLN-LKSELAKRLVLQLNTSYSQTEQKQTS-----HSQSSSMNQMVRRILTTKPTLM 439
            Y+ R N     L  RL L +N +Y +T +  T      +++  ++ +   R   T P   
Sbjct: 376  YTARFNGTHKALEGRLRLGINMTYGKTAEDNTPISSNINNEGGNILKDAIRWAPTLPVTN 435

Query: 440  PGDQIYEDENVEYVPADNPYIMATELKDILQQRFFILNASLTYNFGKGLSWKGAGSFNRT 499
            P    Y+   +   P     +   E+ D      F+ N  + ++    L+++     N  
Sbjct: 436  PDGSYYQIGELRINP-----VSWVEVDDERNTNLFLGNVDVAFDIMDELTFRMNIGHNDQ 490

Query: 500  DGSRSTYYPIGTNAGNSAHGMAFRGEDNRQNIVLETTVNYDRKFKKHHHINAVLGYTHED 559
               R T  P    AG +  G A   +    + V+E T+ Y++    + ++N + GY+ + 
Sbjct: 491  YVERFTNMPATHPAGETDGGRASINKLKNYSSVMEATLTYNKDLGNNTNLNLLGGYSFQR 550

Query: 560  RQRKTLAIQVGDFAGNDLLYYAIGEGTNTMDKSSSVIQTKLSSFLGRMNYTLYDRYIFTA 619
               +    +  +F  + + +  I  G N +  +S     +L+S  GR N  L DRY+FT 
Sbjct: 551  FVTEYTFTEANNFVSSSVKWNLIQSG-NILSNTSYKSANRLASVFGRANLRLKDRYLFTF 609

Query: 620  TGRYDGSSLLASGNRWSFFPSFAVAWRINQEKFMKDIPAISNIKLRLSYGVTGNQSI--- 676
            T R DGSS     NRW  FPS A AW I +E FMK   A   +KLR+ YGVTGNQ I   
Sbjct: 610  TLRNDGSSRFGENNRWGLFPSGAFAWNIAEEGFMK-ASAFDQLKLRMGYGVTGNQEIPND 668

Query: 677  AYAAPLAIMNHVRSYSGGAVTHGMVNGKLANPNLGWESTATYNAGLDLGFIDNRFRVTMN 736
             Y   L I        GG     ++    ANP+L WE T   N GLD GF +NR   T++
Sbjct: 669  LYRQQLGIAGSAVYVLGGEAIPSVLPTNYANPDLQWEQTNQLNIGLDFGFWENRLTGTID 728

Query: 737  VYQRTTKDMLMNFGLPLSSGYGSIPYNMGKMTNKGFELEASADILTGR-VKWTLGGNIYL 795
             Y++ T ++L+ F     S   +   N+G++ NKG E+  +AD++  R   W +  N   
Sbjct: 729  YYEKYTNNLLLQFSTAAPSVVNTQWANVGEVENKGLEVSLNADLIIDRPFSWNMNVNFSR 788

Query: 796  NRNKVDDISGNEL----LGTSYLAGGGVFSQSIHITKAGYPVGSFYGYVVDGVYQNEAEA 851
            NRN+V  +S  +     + TS L+G         I K G P+G+FYG    G+ +N  E 
Sbjct: 789  NRNEVTSLSNEQFSRDEIRTSPLSGVITPKDFSQIIKPGLPLGTFYGRQFTGLDENGMET 848

Query: 852  KLAPFDTPQATPGSLRFKDISGPDGLPDGKITSDDMTIIGTAEPKFNYGINSELSWKGLT 911
             L                D  G DG         D+ +IG A P F YG+     W    
Sbjct: 849  YL----------------DEDGEDGA--------DLVVIGNANPDFIYGMTHRFMWNNFD 884

Query: 912  LSMIFTGRVGGDIANLNRYFLDSFTDTNDNIRAEAWEGRWQGEGTSNFYPAVNGSQGSSY 971
             S+   G VG D+ N N     S+T++   I               N   +   S  S  
Sbjct: 885  ASLTLRGVVGNDVLN-NTAAEFSYTNSTPGI---------------NILESSLSSGVSRD 928

Query: 972  FNKRFSTFLLEDGSFFRLKNLTLAYQFSLKKLRWLRSVRVFGTVTNVFTITNYSGYDPEV 1031
               +FS+  LEDGS+ RL N+ + Y F + +L +L+  R++ T  N+F +T YSGYDPEV
Sbjct: 929  QTAQFSSRWLEDGSYLRLDNINIGYNFDVSELGFLKRARLYVTGQNLFVLTGYSGYDPEV 988

Query: 1032 SITS---GAMSPNVDYAAYPSSRTYSMGINLAF 1061
               +   G  +  +DY AYP  R + +G + +F
Sbjct: 989  RTNTNGGGNAAIGIDYLAYPRPRVFMLGGSFSF 1021