Pairwise Alignments

Query, 280 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 128 a.a., helix-turn-helix domain-containing protein from Serratia liquefaciens MT49

 Score = 47.8 bits (112), Expect = 1e-10
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 7/103 (6%)

Query: 168 SLVHPLSKYTSTFQYFILQNYKKVKTVEELAQLGGYTVSTLRRIFNNVFHEPVYEWMQAR 227
           SLV  LSK+  T       +  +V  +EELA+  GY++  ++++F       + ++++ R
Sbjct: 8   SLVCALSKWVET-------HLGRVIHLEELAEYSGYSLWHMQKLFKEATGISLGKYIRER 60

Query: 228 RKEGILDELLNTNNSISEICYKYGFESLPHFSNFCKKFFGASP 270
           R  G + +L  ++ SI +I   +GF S  HF+   +K F  +P
Sbjct: 61  RLAGAVYQLRTSDASIFDIALDFGFGSQSHFTYMFRKRFNITP 103