Pairwise Alignments
Query, 1376 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1321 a.a., response regulator receiver domain protein from Bacteroides ovatus ATCC 8483
Score = 511 bits (1317), Expect = e-148
Identities = 381/1364 (27%), Positives = 663/1364 (48%), Gaps = 115/1364 (8%)
Query: 33 LSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFITYYKEEQSSSVQSITGNELNEVYTDP 92
L+ + + SI QDK GF+W T+ GLNKF+G +F YY + S+ S++ N + + D
Sbjct: 31 LTCDLITSICQDKDGFIWIGTDYGLNKFNGIQFTHYYNNPKDST--SLSDNSVKALMLDN 88
Query: 93 VQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKG-LWVCT 151
+ +W+ GL Y E +F ++ E+ S HI Q G +WV +
Sbjct: 89 -EGTLWVGGI-GGLQYYVPEENAFRTIKF--EESSSF------HIMCITQLRSGEIWVGS 138
Query: 152 YYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAED--GKLYIGHVEGGLSILSLND 209
RGI + TG T + +P + SE ED G ++IG GL +
Sbjct: 139 SGRGIFRIRKDTG--TGEQMTDIPDV-SEHAHYGVIYEDRHGSIWIGVNGTGLLRYDPST 195
Query: 210 KSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNFHNNPGNI 269
++ K + + G+ + + +D +GN + T ++ + FT +N +
Sbjct: 196 RTSKIYTRAVLDG----GSTISGMAEDHSGNFLLSTGTTAYYYDRENDRFTKIEHNESWL 251
Query: 270 HGALSSYIFSIKQLKDNKLWIATELNGIMIL--DLQQNQFLLPEQIRFEFIREGDNNYSL 327
SI + ++AT G+ ++ DL++ L E I FI +
Sbjct: 252 PAR------SILVSQKGTRYLATFGKGLKVIQPDLKE---LRSEVITLPFI-------DV 295
Query: 328 SNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCD 387
NA R I++D N+WIG + G+ +S FH WS + ++ V++++
Sbjct: 296 DNAKIRAIYEDHNQNLWIGCYHRGMVMVSKESTPFHFWSVPTREYPQAG----VITALYK 351
Query: 388 DGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL-KDSEGNLWFGTYLGNI 446
D G + G +G G+ + + + L S + S+ KD GNLWFG Y +
Sbjct: 352 DDDGHIVSGVEGEGVFKITSEGNITDH------LFSGKTVSSIYKDYSGNLWFGGYYSGL 405
Query: 447 SYYNTRLK-KFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTS 505
+ + +F + E++ L D++ D +++ F+ + + Y +S
Sbjct: 406 YMQDAKGNVRFMLPEIK---LKDIKKITGDDKGNLYLSLFGSGFIRYHLPTQTVTEYQSS 462
Query: 506 NSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQY--EGFCSNTINQIYR 563
+ L N++ ++ DS R WIG G V + P + KF + + +
Sbjct: 463 SGGLRNNWIYTLLLDSRERLWIGHCNG-VDYFDP---VTEKFTPVLSQSLGNFITYSLLE 518
Query: 564 SSKGQMWLATGEGLVCF-PSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGIS 622
+G +W T +GL+C+ P + F Y + ++GL N + ++ED+ GNIW ST GI+
Sbjct: 519 DVRGNIWAGTNKGLMCYHPGTKEFHY--YDEEDGLSNNFVYGLAEDERGNIWCSTLKGIN 576
Query: 623 CYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSINGLCFFNPDIAINSPQIPP 682
++ +Y + + G + NGLIY G + G+ F+PD
Sbjct: 577 LIKVAENKIASYYSERGLVDNEYTIGASYQSMNGLIYLGGVKGITTFHPDSVTAQKGKST 636
Query: 683 VVITKVRIPGRLTSREKNETAIPISE------GEIELTHEQNSFNLTFNVQDYSLANQVE 736
V+++ + + G + + PI + +I L +E N+F L F+ DY + +
Sbjct: 637 VILSNLYLGGEAVTAKSKSGGKPILDTFVTRADKISLAYEDNTFTLEFSTLDYRNSGNIF 696
Query: 737 YAYMLKGLENSWYTINEQ-NSVTFRNIPPGKYEFLVKARLHNQDWSEDTTSLRIHINPPL 795
Y Y ++ E +W + N +T+ ++ GKY F ++A + Q +RI I P
Sbjct: 697 YEYRIREYEKNWTSTQLGINQITYNHLNSGKYTFEIRACENGQ--YTPVKVIRIDIAAPW 754
Query: 796 WLTWWAKLIYILITISIIYTIIHAYKKKIDLESLYTLEKKNHEQEQELNQERLRFYTNIT 855
W + A + Y LI +++ + I Y ++ H++E +N+ER++ + N++
Sbjct: 755 WRSSLAYVCYALILLAVAFQI-------------YLSVRRRHQKE--MNEERIKLFINLS 799
Query: 856 HELRTPLTLILGPLEDMQKDTSLPTRQAQKLSVIHLSALRLLNLINQILEFRKTETQNKK 915
HE+R+P+TLI+ PLE++ K + L ++ +A R++NL+NQ+L+ RK E
Sbjct: 800 HEIRSPMTLIVSPLENLLK-RDYDADTMKMLRLMQKNANRIINLMNQLLDMRKIEKGQLN 858
Query: 916 LCVCKGNIVPLIHEIGLKYKELNQKKAIDFQIQIEKEEMPLFFDKEIITIILDNLISNAI 975
+ + ++V I E+ + +K+ I+ E+EE+P + D +L NL+SNA
Sbjct: 859 IHCVETDMVDYIKELISLFTYQAEKRNINLCFDYEQEELPAWIDPNNFDKVLVNLLSNAF 918
Query: 976 KYT-EQGKITLSLYPTTRNGVT------YTEIKVSDTGYGISAEALPHVFDRYYQ--ESG 1026
KYT + G+I +SL N +T + EI+V D+G GI A L +F+R+YQ +G
Sbjct: 919 KYTPDGGEIKISLREKV-NELTVGDLQHFIEIEVIDSGSGIDANKLEKIFERFYQAPSNG 977
Query: 1027 KHQASGTGIGLALVRNLVELHEGEIRVESIQN-EGSTFYISL------LTDNIYPNALHG 1079
+ + G GIGL L R +V+LH G I + Q+ +GS F I + L + + +A +
Sbjct: 978 FNGSIGFGIGLNLCRMIVKLHHGTINACNRQDAQGSRFIIHIPYGKDHLKKSEWVDAENK 1037
Query: 1080 DSTKQTEEEMISEAVPEDSQNTEPETSKPILLIVEDNEDIQKYIAESFSDSFEVITGSNG 1139
+++ +S+ E++ T + ++IV+D+++I +++ S ++V NG
Sbjct: 1038 TTSRVPSVLGLSQESEEETAKTRNHKANYRIVIVDDDDEILRFLEAELSSQYKVYICRNG 1097
Query: 1140 EEGKQQALNRIPDIIVSDIMMPVMDGITLCRQLKEDVRTSHIPVILLTAKDSLQDKEEGY 1199
+EG Q L + PD+I+SD++MP MDGI+L + ++ + SHIP ILLT+K +D+ EG
Sbjct: 1098 KEGLQTILKQQPDLIISDVVMPEMDGISLLKTIRNNPNVSHIPFILLTSKAEYKDRIEGL 1157
Query: 1200 EVGADSYLTKPFSASLLRSRINNLLDSRKKLIAQFQQTGTNHNPNSHLDEKRSIITEALS 1259
GAD+YL KPF LR I NL+++R L +F + D+ I
Sbjct: 1158 SKGADAYLGKPFVVEELRVHIKNLIETRLLLKGKF---------SGVRDQVGKIEIAENK 1208
Query: 1260 KLDNEFIEKITQLVEDNLSSEKIDITYLSDKMCMSGSTLYRKMKALTGLSTNEYIRKVKM 1319
D +E++ ++ L + ++ L+ ++ +S L+RKMK +TG+ST+ +IR ++M
Sbjct: 1209 SGDERLMERVMNVMNKFLDDSEFNVEMLAREVGLSRVQLHRKMKDITGVSTSVFIRNLRM 1268
Query: 1320 QNAERLLLEGKYNISEIAYKIGMNSTGYFRQCFKDEFGVSPSDY 1363
+ A LL EGK NISEIA +G +S F FK +GVSPS+Y
Sbjct: 1269 KKAAALLQEGKLNISEIADAVGFDSQANFATVFKKFYGVSPSEY 1312
Score = 77.0 bits (188), Expect = 1e-17
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 373 NESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYN--KENRELLSNSVLCSL 430
+ L+ +++S+C D G +WIGTD G+N F + YN K++ L NSV +
Sbjct: 27 DSKQLTCDLITSICQDKDGFIWIGTD-YGLNKFNGIQFTHYYNNPKDSTSLSDNSVKALM 85
Query: 431 KDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHA-GVF 489
D+EG LW G +G + YY F+ I+ E++ + + ++ +IW+G+ G+F
Sbjct: 86 LDNEGTLWVGG-IGGLQYYVPEENAFRTIKFEESSSFHIMCITQLRSGEIWVGSSGRGIF 144
Query: 490 VIDLASKKVIHHYDTSNSQLLENF--------VRSIAQDSEGRFWIGTFGGGVGIYTPDM 541
I DT + + + I +D G WIG G G+ Y P
Sbjct: 145 RI---------RKDTGTGEQMTDIPDVSEHAHYGVIYEDRHGSIWIGVNGTGLLRYDPST 195
Query: 542 QLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG 574
+ + + + +TI+ + G L+TG
Sbjct: 196 RTSKIYTRAVLDGGSTISGMAEDHSGNFLLSTG 228
Score = 47.8 bits (112), Expect = 7e-09
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 32 GLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFITYYKEEQSSSVQSITGNELNEVYTD 91
GL NN++ ++ D + LW G++ FD E+ + + GN + +
Sbjct: 465 GLRNNWIYTLLLDSRERLWIGHCNGVDYFDPV------TEKFTPVLSQSLGNFITYSLLE 518
Query: 92 PVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCT 151
V+ IW T + GL Y+ T+ F Y D + ++N+ + + + G +W C+
Sbjct: 519 DVRGNIWAGTNK-GLMCYHPGTKEFHYY-----DEEDGLSNNFVYGLAEDERG-NIW-CS 570
Query: 152 YYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTAT-EAEDGKLYIGHVEG 200
+GI + +A K Y S + +E T A+ ++ +G +Y+G V+G
Sbjct: 571 TLKGINLIKVAENKIASY-YSERGLVDNEYTIGASYQSMNGLIYLGGVKG 619
Score = 38.9 bits (89), Expect = 3e-06
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 30 EQGLSNNYVLSITQDKQGFLWFATEEGLN--KFDGTRFITYYKE 71
E GLSNN+V + +D++G +W +T +G+N K + +YY E
Sbjct: 548 EDGLSNNFVYGLAEDERGNIWCSTLKGINLIKVAENKIASYYSE 591
Score = 37.4 bits (85), Expect = 1e-05
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 29 IEQGLSNNYVLSITQDKQGFLWFATEEGLNKF-DGTRFITYYKEEQSSSVQSITGNELNE 87
+ Q L N S+ +D +G +W T +GL + GT+ YY EE S + G +E
Sbjct: 504 LSQSLGNFITYSLLEDVRGNIWAGTNKGLMCYHPGTKEFHYYDEEDGLSNNFVYGLAEDE 563
Query: 88 VYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGL 147
+ IW +T + G+N + Y + L+ N+ T I +S Q+ GL
Sbjct: 564 ------RGNIWCSTLK-GINLIKVAENKIASYY----SERGLVDNEYT-IGASYQSMNGL 611
Query: 148 WVCTYYRGI 156
+GI
Sbjct: 612 IYLGGVKGI 620