Pairwise Alignments

Query, 541 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 506 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  139 bits (349), Expect = 3e-37
 Identities = 150/548 (27%), Positives = 243/548 (44%), Gaps = 77/548 (14%)

Query: 8   YMCMAALFSGALTSCNESSFLNLSDPNYFTESNFWKDKADAESALAAAYSPIKGA-MYG- 65
           Y+ +  L + A  SCNE   LN  +PN  +   F+K      +A+ AAY+ ++   +Y  
Sbjct: 6   YILIVLLMAWA-QSCNEEK-LNPVNPNELSTETFYKTGPQYVAAVNAAYAALQANDLYNR 63

Query: 66  -YFGAFDGWLNLNGRGDDIYTIKGEEVPMWNIANFLNSPSTGNDP-----YGALYSGIQR 119
            YF   D         DD+ +  G      + A  LN    G++      +   Y  IQR
Sbjct: 64  EYFFIQDLL------SDDVAS--GGAQLEAHRARVLNHVFDGSNSLVLANWRGWYRVIQR 115

Query: 120 ANIVLRYIDQIPASGITEEDRSMIKGEALFLRGYQYFLLVNNYKEVPLRLIPSNEDETNK 179
           AN+V+  +DQ P   I+E  R  + GEA FLRG  Y+ L   +  VPL  + +   +   
Sbjct: 116 ANLVIANVDQ-PQEDISENLRDRVLGEAYFLRGLAYYELSTLWGGVPLMTVSATGPDGAP 174

Query: 180 AAATEAALWAQVEEDLDNAIKCNLPVERSTAKE--RITKGAAIAMLGKVYATQHKYPEAK 237
            A+ E + + QV +DL  AI    P    +  +  R + GAA A+L K++  +  +  AK
Sbjct: 175 RASQEDS-YQQVIDDLTAAIGLLPPKSTYSGADVGRASIGAAQAVLAKLHLFRGDFAAAK 233

Query: 238 QLLGTLLKAPYSYELMDNFEKNFTNEEEFNKESVFELAYSPD--GDYSWSNE-SGICLGC 294
            LL  ++ +   Y L+D +  NF  E E N ES++E+ +S D   D  W+ + +GI    
Sbjct: 234 PLLQAIIDSG-EYRLVDRYLDNFEEENENNAESLWEVQFSEDFGTDGGWNADGNGIAEVT 292

Query: 295 YIPQFIGPVKSGGWAKLMPNSLIVGEFTKETRPSDADTKFDKRMYASLFFDAANYGDKVP 354
           +  Q  GP     W  ++PN  +V EF +E+  ++ D   D R   +L            
Sbjct: 293 FRGQEYGPT---AWRNIIPNPTLVAEFEQESNGAEKD---DPRYGYTL------------ 334

Query: 355 NEKWYGNNYSMDDLWEGNEGKMAGGAPSFNVNGTAGKFLIKKNTAYYVDDKAPDNMGNKE 414
                   YS+ D +   E  ++      NV G       +K    Y  +      G   
Sbjct: 335 --------YSLGDTFNNGESVLSED----NVQGNTSVPSWRKYQMIYKREAENTQSG--- 379

Query: 415 GRSSNLRVMRFAEVLLLYAEACAKTNDPDGANYALKQIRQRAGLT--------EKTFAQA 466
               N RV+R+A+VLL+ AE   +T+ P  A   + Q+R RA +           T  Q 
Sbjct: 380 ---INFRVIRYADVLLMMAEVENETSGPASALPYINQVRARADVAMPPYPTAQYPTGTQE 436

Query: 467 ELMNEIEHQCLLEFFAEGHRFDDLKRWYSPSEIQLIFKANGKQGAENFQEKHLYYPIPTS 526
           E+   I+H+  +E   E  R  D++RW     ++        +    + +++   PIP S
Sbjct: 437 EMRRAIQHERRVELAGEQIRNRDIRRWRRMGYLE-------NEPIPVYSDRYDLLPIPLS 489

Query: 527 ELNNNTAM 534
           E++NN+A+
Sbjct: 490 EIDNNSAL 497